Gene
RNA
| Item | Value |
|---|---|
| gene id | G1287790 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 36894499 ~ 36894905 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1469919 | True | 239 | lncRNA | 0.35 | 2 | 36894499 | 36894905 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490839 | LOC106588460 | coding | upstream | 88544 | 36805006 ~ 36805955 (+) |
| LOC110490026 | m3k8 | coding | upstream | 258767 | 36616159 ~ 36635732 (+) |
| LOC110490024 | LOC106590043 | coding | upstream | 630417 | 36166507 ~ 36264082 (+) |
| LOC110490021 | LOC106590041 | coding | upstream | 906250 | 35897274 ~ 35988249 (+) |
| LOC110490020 | LOC106590040 | coding | upstream | 999392 | 35847886 ~ 35895107 (+) |
| nrp1a | LOC106590027 | coding | downstream | 952361 | 37847266 ~ 37960593 (+) |
| LOC110490033 | LOC106590025 | coding | downstream | 1079817 | 37974722 ~ 38017988 (+) |
| LOC110490034 | rab18 | coding | downstream | 1123306 | 38018211 ~ 38038025 (+) |
| LOC110490038 | LOC106590019 | coding | downstream | 1599384 | 38494289 ~ 38568479 (+) |
| LOC110490039 | LOC106590018 | coding | downstream | 1681730 | 38576635 ~ 38580756 (+) |
| G1287781 | NA | non-coding | upstream | 25609 | 36868547 ~ 36868890 (+) |
| G1287764 | NA | non-coding | upstream | 50358 | 36843933 ~ 36844141 (+) |
| G1287746 | NA | non-coding | upstream | 65201 | 36829035 ~ 36829298 (+) |
| G1287656 | NA | non-coding | upstream | 112874 | 36775537 ~ 36781625 (+) |
| G1287651 | NA | non-coding | upstream | 128984 | 36762060 ~ 36765515 (+) |
| G1287795 | NA | non-coding | downstream | 15851 | 36910756 ~ 36911107 (+) |
| G1287891 | NA | non-coding | downstream | 59474 | 36954379 ~ 36954640 (+) |
| G1288031 | NA | non-coding | downstream | 159691 | 37054596 ~ 37054801 (+) |
| G1288296 | NA | non-coding | downstream | 366114 | 37261019 ~ 37261726 (+) |
| G1288319 | NA | non-coding | downstream | 382616 | 37277521 ~ 37277920 (+) |
| G1287489 | LOC106590045 | other | upstream | 383987 | 36509078 ~ 36510512 (+) |
| G1286648 | LOC106590042 | other | upstream | 801103 | 36035583 ~ 36093396 (+) |
| G1284354 | NA | other | upstream | 2782228 | 34111807 ~ 34112271 (+) |
| G1282302 | NA | other | upstream | 4196463 | 32687558 ~ 32698036 (+) |
| G1281462 | NA | other | upstream | 4897986 | 31996167 ~ 31996513 (+) |
| G1289491 | NA | other | downstream | 1288531 | 38183436 ~ 38184003 (+) |
| G1289710 | NA | other | downstream | 1699975 | 38594880 ~ 38600241 (+) |
| G1290549 | LOC106590036 | other | downstream | 2142100 | 39037005 ~ 39061248 (+) |
| G1290614 | NA | other | downstream | 2231367 | 39126272 ~ 39127009 (+) |
| G1291464 | NA | other | downstream | 3172653 | 40067558 ~ 40067907 (+) |
