Gene
RNA
| Item | Value |
|---|---|
| gene id | G1287891 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 36954379 ~ 36954640 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1470026 | True | 262 | lncRNA | 0.43 | 1 | 36954379 | 36954640 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490032 | cul2 | coding | upstream | 52315 | 36869213 ~ 36902064 (+) |
| LOC110490839 | LOC106588460 | coding | upstream | 148424 | 36805006 ~ 36805955 (+) |
| LOC110490026 | m3k8 | coding | upstream | 318647 | 36616159 ~ 36635732 (+) |
| LOC110490024 | LOC106590043 | coding | upstream | 690297 | 36166507 ~ 36264082 (+) |
| LOC110490021 | LOC106590041 | coding | upstream | 966130 | 35897274 ~ 35988249 (+) |
| nrp1a | LOC106590027 | coding | downstream | 892626 | 37847266 ~ 37960593 (+) |
| LOC110490033 | LOC106590025 | coding | downstream | 1020082 | 37974722 ~ 38017988 (+) |
| LOC110490034 | rab18 | coding | downstream | 1063571 | 38018211 ~ 38038025 (+) |
| LOC110490038 | LOC106590019 | coding | downstream | 1539649 | 38494289 ~ 38568479 (+) |
| LOC110490039 | LOC106590018 | coding | downstream | 1621995 | 38576635 ~ 38580756 (+) |
| G1287795 | NA | non-coding | upstream | 43272 | 36910756 ~ 36911107 (+) |
| G1287790 | NA | non-coding | upstream | 59474 | 36894499 ~ 36894905 (+) |
| G1287781 | NA | non-coding | upstream | 85489 | 36868547 ~ 36868890 (+) |
| G1287764 | NA | non-coding | upstream | 110238 | 36843933 ~ 36844141 (+) |
| G1287746 | NA | non-coding | upstream | 125081 | 36829035 ~ 36829298 (+) |
| G1288031 | NA | non-coding | downstream | 99956 | 37054596 ~ 37054801 (+) |
| G1288296 | NA | non-coding | downstream | 306379 | 37261019 ~ 37261726 (+) |
| G1288319 | NA | non-coding | downstream | 322881 | 37277521 ~ 37277920 (+) |
| G1288345 | NA | non-coding | downstream | 337224 | 37291864 ~ 37292205 (+) |
| G1288347 | NA | non-coding | downstream | 343011 | 37297651 ~ 37297891 (+) |
| G1287489 | LOC106590045 | other | upstream | 443867 | 36509078 ~ 36510512 (+) |
| G1286648 | LOC106590042 | other | upstream | 860983 | 36035583 ~ 36093396 (+) |
| G1284354 | NA | other | upstream | 2842108 | 34111807 ~ 34112271 (+) |
| G1282302 | NA | other | upstream | 4256343 | 32687558 ~ 32698036 (+) |
| G1281462 | NA | other | upstream | 4957866 | 31996167 ~ 31996513 (+) |
| G1289491 | NA | other | downstream | 1228796 | 38183436 ~ 38184003 (+) |
| G1289710 | NA | other | downstream | 1640240 | 38594880 ~ 38600241 (+) |
| G1290549 | LOC106590036 | other | downstream | 2082365 | 39037005 ~ 39061248 (+) |
| G1290614 | NA | other | downstream | 2171632 | 39126272 ~ 39127009 (+) |
| G1291464 | NA | other | downstream | 3112918 | 40067558 ~ 40067907 (+) |
