Gene
RNA
| Item | Value |
|---|---|
| gene id | G1288354 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 37301212 ~ 37301436 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1470500 | True | 225 | lncRNA | 0.40 | 1 | 37301212 | 37301436 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490032 | cul2 | coding | upstream | 399148 | 36869213 ~ 36902064 (+) |
| LOC110490839 | LOC106588460 | coding | upstream | 495257 | 36805006 ~ 36805955 (+) |
| LOC110490026 | m3k8 | coding | upstream | 665480 | 36616159 ~ 36635732 (+) |
| LOC110490024 | LOC106590043 | coding | upstream | 1037130 | 36166507 ~ 36264082 (+) |
| LOC110490021 | LOC106590041 | coding | upstream | 1312963 | 35897274 ~ 35988249 (+) |
| nrp1a | LOC106590027 | coding | downstream | 545830 | 37847266 ~ 37960593 (+) |
| LOC110490033 | LOC106590025 | coding | downstream | 673286 | 37974722 ~ 38017988 (+) |
| LOC110490034 | rab18 | coding | downstream | 716775 | 38018211 ~ 38038025 (+) |
| LOC110490038 | LOC106590019 | coding | downstream | 1192853 | 38494289 ~ 38568479 (+) |
| LOC110490039 | LOC106590018 | coding | downstream | 1275199 | 38576635 ~ 38580756 (+) |
| G1288347 | NA | non-coding | upstream | 3321 | 37297651 ~ 37297891 (+) |
| G1288345 | NA | non-coding | upstream | 9007 | 37291864 ~ 37292205 (+) |
| G1288319 | NA | non-coding | upstream | 23292 | 37277521 ~ 37277920 (+) |
| G1288296 | NA | non-coding | upstream | 39486 | 37261019 ~ 37261726 (+) |
| G1288031 | NA | non-coding | upstream | 246411 | 37054596 ~ 37054801 (+) |
| G1288358 | NA | non-coding | downstream | 4990 | 37306426 ~ 37306673 (+) |
| G1288362 | NA | non-coding | downstream | 8248 | 37309684 ~ 37310347 (+) |
| G1288373 | NA | non-coding | downstream | 23948 | 37325384 ~ 37325644 (+) |
| G1288483 | NA | non-coding | downstream | 98740 | 37400176 ~ 37400495 (+) |
| G1288580 | NA | non-coding | downstream | 188926 | 37490362 ~ 37490843 (+) |
| G1287489 | LOC106590045 | other | upstream | 790700 | 36509078 ~ 36510512 (+) |
| G1286648 | LOC106590042 | other | upstream | 1207816 | 36035583 ~ 36093396 (+) |
| G1284354 | NA | other | upstream | 3188941 | 34111807 ~ 34112271 (+) |
| G1282302 | NA | other | upstream | 4603176 | 32687558 ~ 32698036 (+) |
| G1281462 | NA | other | upstream | 5304699 | 31996167 ~ 31996513 (+) |
| G1289491 | NA | other | downstream | 882000 | 38183436 ~ 38184003 (+) |
| G1289710 | NA | other | downstream | 1293444 | 38594880 ~ 38600241 (+) |
| G1290549 | LOC106590036 | other | downstream | 1735569 | 39037005 ~ 39061248 (+) |
| G1290614 | NA | other | downstream | 1824836 | 39126272 ~ 39127009 (+) |
| G1291464 | NA | other | downstream | 2766122 | 40067558 ~ 40067907 (+) |
