G1288358


Basic Information

Item Value
gene id G1288358
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 37306426 ~ 37306673 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1470504
GCTTATAGAAACATACCCCTAGAGACTTGCAGCTGAATTAAGAACTATACATATTtagacgagcaatgtcagagggcatagactaaaatacatttgtatagaatagaatacattatatacagtgccttgcgaaagtattcggcccccttgaacttcgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1470504 True 248 lncRNA 0.36 1 37306426 37306673

Neighbor

gene id symbol gene type direction distance location
LOC110490032 cul2 coding upstream 404362 36869213 ~ 36902064 (+)
LOC110490839 LOC106588460 coding upstream 500471 36805006 ~ 36805955 (+)
LOC110490026 m3k8 coding upstream 670694 36616159 ~ 36635732 (+)
LOC110490024 LOC106590043 coding upstream 1042344 36166507 ~ 36264082 (+)
LOC110490021 LOC106590041 coding upstream 1318177 35897274 ~ 35988249 (+)
nrp1a LOC106590027 coding downstream 540593 37847266 ~ 37960593 (+)
LOC110490033 LOC106590025 coding downstream 668049 37974722 ~ 38017988 (+)
LOC110490034 rab18 coding downstream 711538 38018211 ~ 38038025 (+)
LOC110490038 LOC106590019 coding downstream 1187616 38494289 ~ 38568479 (+)
LOC110490039 LOC106590018 coding downstream 1269962 38576635 ~ 38580756 (+)
G1288354 NA non-coding upstream 4990 37301212 ~ 37301436 (+)
G1288347 NA non-coding upstream 8535 37297651 ~ 37297891 (+)
G1288345 NA non-coding upstream 14221 37291864 ~ 37292205 (+)
G1288319 NA non-coding upstream 28506 37277521 ~ 37277920 (+)
G1288296 NA non-coding upstream 44700 37261019 ~ 37261726 (+)
G1288362 NA non-coding downstream 3011 37309684 ~ 37310347 (+)
G1288373 NA non-coding downstream 18711 37325384 ~ 37325644 (+)
G1288483 NA non-coding downstream 93503 37400176 ~ 37400495 (+)
G1288580 NA non-coding downstream 183689 37490362 ~ 37490843 (+)
G1288669 NA non-coding downstream 255990 37562663 ~ 37563128 (+)
G1287489 LOC106590045 other upstream 795914 36509078 ~ 36510512 (+)
G1286648 LOC106590042 other upstream 1213030 36035583 ~ 36093396 (+)
G1284354 NA other upstream 3194155 34111807 ~ 34112271 (+)
G1282302 NA other upstream 4608390 32687558 ~ 32698036 (+)
G1281462 NA other upstream 5309913 31996167 ~ 31996513 (+)
G1289491 NA other downstream 876763 38183436 ~ 38184003 (+)
G1289710 NA other downstream 1288207 38594880 ~ 38600241 (+)
G1290549 LOC106590036 other downstream 1730332 39037005 ~ 39061248 (+)
G1290614 NA other downstream 1819599 39126272 ~ 39127009 (+)
G1291464 NA other downstream 2760885 40067558 ~ 40067907 (+)

Expression


Co-expression Network