G1288669


Basic Information

Item Value
gene id G1288669
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 37562663 ~ 37563128 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1470829
GTATATTTATTTTAGTACTTTATTGTGCTGGGTGTGGAATGCAGGCTTTTACTAAGCGTTGATATCTTAATAGTGCAATTATGGCGGTCTGAAAGTGAGCATGAACAATATTGTTGCCAAGGGTTCACACATAATAACTTATTCTGGACTATTCTGTCTACTGGAGTAGGAATCAATTGATGAATTTCCAATCAATCGTTTTGGAAACATCCTCATGTATACATTCTCAGTTGAGATTTGTACTGTACAGTCGTGgaaaaaagttttgagaattacacaaatattaattttcacaaagtctgctgcctcagcttgtatgatggcaatttgcatatactccagaatgttatgaagagtgatcagatgaattgcaattaattgcaaagtccctctatgccatgcaaatgaactgaatccccaaaaaacatttcactgcatttcagccctgccacaaaaggaccagctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1470829 True 466 lncRNA 0.37 1 37562663 37563128

Neighbor

gene id symbol gene type direction distance location
LOC110490032 cul2 coding upstream 660599 36869213 ~ 36902064 (+)
LOC110490839 LOC106588460 coding upstream 756708 36805006 ~ 36805955 (+)
LOC110490026 m3k8 coding upstream 926931 36616159 ~ 36635732 (+)
LOC110490024 LOC106590043 coding upstream 1298581 36166507 ~ 36264082 (+)
LOC110490021 LOC106590041 coding upstream 1574414 35897274 ~ 35988249 (+)
nrp1a LOC106590027 coding downstream 284138 37847266 ~ 37960593 (+)
LOC110490033 LOC106590025 coding downstream 411594 37974722 ~ 38017988 (+)
LOC110490034 rab18 coding downstream 455083 38018211 ~ 38038025 (+)
LOC110490038 LOC106590019 coding downstream 931161 38494289 ~ 38568479 (+)
LOC110490039 LOC106590018 coding downstream 1013507 38576635 ~ 38580756 (+)
G1288580 NA non-coding upstream 71820 37490362 ~ 37490843 (+)
G1288483 NA non-coding upstream 162168 37400176 ~ 37400495 (+)
G1288373 NA non-coding upstream 237019 37325384 ~ 37325644 (+)
G1288362 NA non-coding upstream 252316 37309684 ~ 37310347 (+)
G1288358 NA non-coding upstream 255990 37306426 ~ 37306673 (+)
G1288677 NA non-coding downstream 4609 37567737 ~ 37567970 (+)
G1288683 NA non-coding downstream 9180 37572308 ~ 37572620 (+)
G1288745 NA non-coding downstream 50011 37613139 ~ 37613355 (+)
G1288826 NA non-coding downstream 106509 37669637 ~ 37669867 (+)
G1288832 NA non-coding downstream 111104 37674232 ~ 37674461 (+)
G1287489 LOC106590045 other upstream 1052151 36509078 ~ 36510512 (+)
G1286648 LOC106590042 other upstream 1469267 36035583 ~ 36093396 (+)
G1284354 NA other upstream 3450392 34111807 ~ 34112271 (+)
G1282302 NA other upstream 4864627 32687558 ~ 32698036 (+)
G1281462 NA other upstream 5566150 31996167 ~ 31996513 (+)
G1289491 NA other downstream 620308 38183436 ~ 38184003 (+)
G1289710 NA other downstream 1031752 38594880 ~ 38600241 (+)
G1290549 LOC106590036 other downstream 1473877 39037005 ~ 39061248 (+)
G1290614 NA other downstream 1563144 39126272 ~ 39127009 (+)
G1291464 NA other downstream 2504430 40067558 ~ 40067907 (+)

Expression


Co-expression Network