G1288883


Basic Information

Item Value
gene id G1288883
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 37705293 ~ 37705501 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1471045
ctttatagttggtaTTATGCTTTGGGGCACTATGCattggcatctgccaaacccatattcgtcagtcggactgccagatggaggAGCGTGAcatatttccactgctccagagtccaatggcggcaagctttacaccacccaagcccacgcttggcattgcacattgtgaccttaggcttgtgtgtggctgttcAGCCaatgaaacccat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1471045 True 209 lncRNA 0.50 1 37705293 37705501

Neighbor

gene id symbol gene type direction distance location
LOC110490032 cul2 coding upstream 803229 36869213 ~ 36902064 (+)
LOC110490839 LOC106588460 coding upstream 899338 36805006 ~ 36805955 (+)
LOC110490026 m3k8 coding upstream 1069561 36616159 ~ 36635732 (+)
LOC110490024 LOC106590043 coding upstream 1441211 36166507 ~ 36264082 (+)
LOC110490021 LOC106590041 coding upstream 1717044 35897274 ~ 35988249 (+)
nrp1a LOC106590027 coding downstream 141765 37847266 ~ 37960593 (+)
LOC110490033 LOC106590025 coding downstream 269221 37974722 ~ 38017988 (+)
LOC110490034 rab18 coding downstream 312710 38018211 ~ 38038025 (+)
LOC110490038 LOC106590019 coding downstream 788788 38494289 ~ 38568479 (+)
LOC110490039 LOC106590018 coding downstream 871134 38576635 ~ 38580756 (+)
G1288842 NA non-coding upstream 23502 37681548 ~ 37681791 (+)
G1288835 NA non-coding upstream 28448 37676463 ~ 37676845 (+)
G1288833 NA non-coding upstream 30118 37674807 ~ 37675175 (+)
G1288832 NA non-coding upstream 30832 37674232 ~ 37674461 (+)
G1288826 NA non-coding upstream 35426 37669637 ~ 37669867 (+)
G1288957 NA non-coding downstream 61342 37766843 ~ 37767047 (+)
G1288968 NA non-coding downstream 66151 37771652 ~ 37771920 (+)
G1288973 NA non-coding downstream 70495 37775996 ~ 37776205 (+)
G1288985 NA non-coding downstream 76897 37782398 ~ 37782598 (+)
G1288999 NA non-coding downstream 88491 37793992 ~ 37794192 (+)
G1287489 LOC106590045 other upstream 1194781 36509078 ~ 36510512 (+)
G1286648 LOC106590042 other upstream 1611897 36035583 ~ 36093396 (+)
G1284354 NA other upstream 3593022 34111807 ~ 34112271 (+)
G1282302 NA other upstream 5007257 32687558 ~ 32698036 (+)
G1281462 NA other upstream 5708780 31996167 ~ 31996513 (+)
G1289491 NA other downstream 477935 38183436 ~ 38184003 (+)
G1289710 NA other downstream 889379 38594880 ~ 38600241 (+)
G1290549 LOC106590036 other downstream 1331504 39037005 ~ 39061248 (+)
G1290614 NA other downstream 1420771 39126272 ~ 39127009 (+)
G1291464 NA other downstream 2362057 40067558 ~ 40067907 (+)

Expression


Co-expression Network