Gene
RNA
| Item | Value |
|---|---|
| gene id | G1288957 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 37766843 ~ 37767047 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1471122 | True | 205 | lncRNA | 0.32 | 1 | 37766843 | 37767047 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490032 | cul2 | coding | upstream | 864779 | 36869213 ~ 36902064 (+) |
| LOC110490839 | LOC106588460 | coding | upstream | 960888 | 36805006 ~ 36805955 (+) |
| LOC110490026 | m3k8 | coding | upstream | 1131111 | 36616159 ~ 36635732 (+) |
| LOC110490024 | LOC106590043 | coding | upstream | 1502761 | 36166507 ~ 36264082 (+) |
| LOC110490021 | LOC106590041 | coding | upstream | 1778594 | 35897274 ~ 35988249 (+) |
| nrp1a | LOC106590027 | coding | downstream | 80219 | 37847266 ~ 37960593 (+) |
| LOC110490033 | LOC106590025 | coding | downstream | 207675 | 37974722 ~ 38017988 (+) |
| LOC110490034 | rab18 | coding | downstream | 251164 | 38018211 ~ 38038025 (+) |
| LOC110490038 | LOC106590019 | coding | downstream | 727242 | 38494289 ~ 38568479 (+) |
| LOC110490039 | LOC106590018 | coding | downstream | 809588 | 38576635 ~ 38580756 (+) |
| G1288883 | NA | non-coding | upstream | 61342 | 37705293 ~ 37705501 (+) |
| G1288842 | NA | non-coding | upstream | 85052 | 37681548 ~ 37681791 (+) |
| G1288835 | NA | non-coding | upstream | 89998 | 37676463 ~ 37676845 (+) |
| G1288833 | NA | non-coding | upstream | 91668 | 37674807 ~ 37675175 (+) |
| G1288832 | NA | non-coding | upstream | 92382 | 37674232 ~ 37674461 (+) |
| G1288968 | NA | non-coding | downstream | 4605 | 37771652 ~ 37771920 (+) |
| G1288973 | NA | non-coding | downstream | 8949 | 37775996 ~ 37776205 (+) |
| G1288985 | NA | non-coding | downstream | 15351 | 37782398 ~ 37782598 (+) |
| G1288999 | NA | non-coding | downstream | 26945 | 37793992 ~ 37794192 (+) |
| G1289018 | NA | non-coding | downstream | 42083 | 37809130 ~ 37809346 (+) |
| G1287489 | LOC106590045 | other | upstream | 1256331 | 36509078 ~ 36510512 (+) |
| G1286648 | LOC106590042 | other | upstream | 1673447 | 36035583 ~ 36093396 (+) |
| G1284354 | NA | other | upstream | 3654572 | 34111807 ~ 34112271 (+) |
| G1282302 | NA | other | upstream | 5068807 | 32687558 ~ 32698036 (+) |
| G1281462 | NA | other | upstream | 5770330 | 31996167 ~ 31996513 (+) |
| G1289491 | NA | other | downstream | 416389 | 38183436 ~ 38184003 (+) |
| G1289710 | NA | other | downstream | 827833 | 38594880 ~ 38600241 (+) |
| G1290549 | LOC106590036 | other | downstream | 1269958 | 39037005 ~ 39061248 (+) |
| G1290614 | NA | other | downstream | 1359225 | 39126272 ~ 39127009 (+) |
| G1291464 | NA | other | downstream | 2300511 | 40067558 ~ 40067907 (+) |
