G1289040


Basic Information

Item Value
gene id G1289040
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 37831741 ~ 37832044 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1471205
gaccaggatggtcaaataataataatcacagacagaacagttgaaactggagcagcagcacggccaggtggactggggacagcaaggagtcatcatgcccggtagtcctgaggcatggtcctaggtctcaggtcctccgagagagagacagagagaattagagagagcatacttaaattcacacaggacaccggataggacaggagaagtactccagatagcaaactgaccctagcccccccgacacataaactactgcagcataaatactggatactgagacaggaggggtcaggagacaatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1471205 True 304 lncRNA 0.50 1 37831741 37832044

Neighbor

gene id symbol gene type direction distance location
LOC110490032 cul2 coding upstream 929677 36869213 ~ 36902064 (+)
LOC110490839 LOC106588460 coding upstream 1025786 36805006 ~ 36805955 (+)
LOC110490026 m3k8 coding upstream 1196009 36616159 ~ 36635732 (+)
LOC110490024 LOC106590043 coding upstream 1567659 36166507 ~ 36264082 (+)
LOC110490021 LOC106590041 coding upstream 1843492 35897274 ~ 35988249 (+)
nrp1a LOC106590027 coding downstream 15222 37847266 ~ 37960593 (+)
LOC110490033 LOC106590025 coding downstream 142678 37974722 ~ 38017988 (+)
LOC110490034 rab18 coding downstream 186167 38018211 ~ 38038025 (+)
LOC110490038 LOC106590019 coding downstream 662245 38494289 ~ 38568479 (+)
LOC110490039 LOC106590018 coding downstream 744591 38576635 ~ 38580756 (+)
G1289031 NA non-coding upstream 12550 37818982 ~ 37819191 (+)
G1289018 NA non-coding upstream 22395 37809130 ~ 37809346 (+)
G1288999 NA non-coding upstream 37549 37793992 ~ 37794192 (+)
G1288985 NA non-coding upstream 49143 37782398 ~ 37782598 (+)
G1288973 NA non-coding upstream 55536 37775996 ~ 37776205 (+)
G1289045 NA non-coding downstream 6870 37838914 ~ 37839126 (+)
G1289050 NA non-coding downstream 13718 37845762 ~ 37845962 (+)
G1289148 NA non-coding downstream 191396 38023440 ~ 38049365 (+)
G1289408 NA non-coding downstream 284923 38116967 ~ 38117233 (+)
G1289432 NA non-coding downstream 299236 38131280 ~ 38131862 (+)
G1287489 LOC106590045 other upstream 1321229 36509078 ~ 36510512 (+)
G1286648 LOC106590042 other upstream 1738345 36035583 ~ 36093396 (+)
G1284354 NA other upstream 3719470 34111807 ~ 34112271 (+)
G1282302 NA other upstream 5133705 32687558 ~ 32698036 (+)
G1281462 NA other upstream 5835228 31996167 ~ 31996513 (+)
G1289491 NA other downstream 351392 38183436 ~ 38184003 (+)
G1289710 NA other downstream 762836 38594880 ~ 38600241 (+)
G1290549 LOC106590036 other downstream 1204961 39037005 ~ 39061248 (+)
G1290614 NA other downstream 1294228 39126272 ~ 39127009 (+)
G1291464 NA other downstream 2235514 40067558 ~ 40067907 (+)

Expression


Co-expression Network