Gene
RNA
| Item | Value |
|---|---|
| gene id | G1289487 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 38179828 ~ 38180128 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1471677 | True | 301 | lncRNA | 0.32 | 1 | 38179828 | 38180128 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490034 | rab18 | coding | upstream | 141803 | 38018211 ~ 38038025 (+) |
| LOC110490033 | LOC106590025 | coding | upstream | 161840 | 37974722 ~ 38017988 (+) |
| nrp1a | LOC106590027 | coding | upstream | 219235 | 37847266 ~ 37960593 (+) |
| LOC110490032 | cul2 | coding | upstream | 1277764 | 36869213 ~ 36902064 (+) |
| LOC110490839 | LOC106588460 | coding | upstream | 1373873 | 36805006 ~ 36805955 (+) |
| LOC110490038 | LOC106590019 | coding | downstream | 314161 | 38494289 ~ 38568479 (+) |
| LOC110490039 | LOC106590018 | coding | downstream | 396507 | 38576635 ~ 38580756 (+) |
| LOC110490723 | LOC106612786 | coding | downstream | 675122 | 38855250 ~ 38856108 (+) |
| LOC110490726 | LOC106600248 | coding | downstream | 902686 | 39082814 ~ 39084700 (+) |
| LOC110490841 | NA | coding | downstream | 907945 | 39086859 ~ 39089636 (+) |
| G1289474 | NA | non-coding | upstream | 15022 | 38164587 ~ 38164806 (+) |
| G1289439 | NA | non-coding | upstream | 43741 | 38135627 ~ 38136087 (+) |
| G1289432 | NA | non-coding | upstream | 47966 | 38131280 ~ 38131862 (+) |
| G1289408 | NA | non-coding | upstream | 62595 | 38116967 ~ 38117233 (+) |
| G1289148 | NA | non-coding | upstream | 130463 | 38023440 ~ 38049365 (+) |
| G1289489 | NA | non-coding | downstream | 1607 | 38181735 ~ 38182325 (+) |
| G1289497 | NA | non-coding | downstream | 13210 | 38193338 ~ 38193634 (+) |
| G1289500 | NA | non-coding | downstream | 15654 | 38195782 ~ 38196100 (+) |
| G1289676 | NA | non-coding | downstream | 295730 | 38475858 ~ 38476241 (+) |
| G1289678 | NA | non-coding | downstream | 297037 | 38477165 ~ 38477380 (+) |
| G1287489 | LOC106590045 | other | upstream | 1669316 | 36509078 ~ 36510512 (+) |
| G1286648 | LOC106590042 | other | upstream | 2086432 | 36035583 ~ 36093396 (+) |
| G1284354 | NA | other | upstream | 4067557 | 34111807 ~ 34112271 (+) |
| G1282302 | NA | other | upstream | 5481792 | 32687558 ~ 32698036 (+) |
| G1281462 | NA | other | upstream | 6183315 | 31996167 ~ 31996513 (+) |
| G1289491 | NA | other | downstream | 3308 | 38183436 ~ 38184003 (+) |
| G1289710 | NA | other | downstream | 414752 | 38594880 ~ 38600241 (+) |
| G1290549 | LOC106590036 | other | downstream | 856877 | 39037005 ~ 39061248 (+) |
| G1290614 | NA | other | downstream | 946144 | 39126272 ~ 39127009 (+) |
| G1291464 | NA | other | downstream | 1887430 | 40067558 ~ 40067907 (+) |
