G1289696


Basic Information

Item Value
gene id G1289696
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 38570346 ~ 38570624 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1471887
CATTACTAAATGACACTGTTGCCTTTCCCCTAGAATTGCACCTCCATACTGtgcgtttggaaagtattcatgacagaaatatcacatttacataagtattcagtccctttactcagtactttgttgaagcacctttggtagcgattacagccttgagtcttcttgggtatgatgctacaaacttGGTACATCCAATAATGACACCGGAGGAGATGGCATTAAAAACTGTAAAatattatgtttcaccgagtcgtggctgaacgacaacacagATAATAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1471887 True 279 lncRNA 0.39 1 38570346 38570624

Neighbor

gene id symbol gene type direction distance location
LOC110490038 LOC106590019 coding upstream 1867 38494289 ~ 38568479 (+)
LOC110490034 rab18 coding upstream 532321 38018211 ~ 38038025 (+)
LOC110490033 LOC106590025 coding upstream 552358 37974722 ~ 38017988 (+)
nrp1a LOC106590027 coding upstream 609753 37847266 ~ 37960593 (+)
LOC110490032 cul2 coding upstream 1668282 36869213 ~ 36902064 (+)
LOC110490039 LOC106590018 coding downstream 6011 38576635 ~ 38580756 (+)
LOC110490723 LOC106612786 coding downstream 284626 38855250 ~ 38856108 (+)
LOC110490726 LOC106600248 coding downstream 512190 39082814 ~ 39084700 (+)
LOC110490841 NA coding downstream 517449 39086859 ~ 39089636 (+)
brca2 NA coding downstream 976720 39547344 ~ 39589108 (+)
G1289678 NA non-coding upstream 92966 38477165 ~ 38477380 (+)
G1289676 NA non-coding upstream 94105 38475858 ~ 38476241 (+)
G1289500 NA non-coding upstream 374246 38195782 ~ 38196100 (+)
G1289497 NA non-coding upstream 376712 38193338 ~ 38193634 (+)
G1289700 NA non-coding downstream 13890 38584514 ~ 38585455 (+)
G1289707 NA non-coding downstream 21868 38592492 ~ 38592692 (+)
G1289708 NA non-coding downstream 22739 38593363 ~ 38593574 (+)
G1289740 NA non-coding downstream 59802 38630426 ~ 38630655 (+)
G1289855 NA non-coding downstream 234008 38804632 ~ 38809711 (+)
G1289491 NA other upstream 386343 38183436 ~ 38184003 (+)
G1287489 LOC106590045 other upstream 2059834 36509078 ~ 36510512 (+)
G1286648 LOC106590042 other upstream 2476950 36035583 ~ 36093396 (+)
G1284354 NA other upstream 4458075 34111807 ~ 34112271 (+)
G1282302 NA other upstream 5872310 32687558 ~ 32698036 (+)
G1289710 NA other downstream 24256 38594880 ~ 38600241 (+)
G1290549 LOC106590036 other downstream 466381 39037005 ~ 39061248 (+)
G1290614 NA other downstream 555648 39126272 ~ 39127009 (+)
G1291464 NA other downstream 1496934 40067558 ~ 40067907 (+)
LOC110490048 il-1racp other downstream 1549645 40089464 ~ 40132600 (+)

Expression


Co-expression Network