G1289708



Basic Information


Item Value
gene id G1289708
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 38593363 ~ 38593574 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1471906
cattgatccatttttcattttccattggttttgtcttgtcttcctacacacctggtttcaatcccattcattacctgttgtgtatttaaccctctgtttccactcatgtctttgtcagagattgtttgttatttcagtgttgtgttgttttttgtATTGTTGTGCGACcggtcctcgtacccactttgtttattgtttacattTAGTGTTTG

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1471906 True 212 lncRNA 0.37 1 38593363 38593574

Neighbor


gene id symbol gene type direction distance location
LOC110490039 LOC106590018 coding upstream 12607 38576635 ~ 38580756 (+)
LOC110490038 LOC106590019 coding upstream 24884 38494289 ~ 38568479 (+)
LOC110490034 rab18 coding upstream 555338 38018211 ~ 38038025 (+)
LOC110490033 LOC106590025 coding upstream 575375 37974722 ~ 38017988 (+)
nrp1a LOC106590027 coding upstream 632770 37847266 ~ 37960593 (+)
LOC110490723 LOC106612786 coding downstream 261676 38855250 ~ 38856108 (+)
LOC110490726 LOC106600248 coding downstream 489240 39082814 ~ 39084700 (+)
LOC110490841 NA coding downstream 494499 39086859 ~ 39089636 (+)
brca2 NA coding downstream 953770 39547344 ~ 39589108 (+)
LOC110490049 LOC106612364 coding downstream 1055796 39649370 ~ 39684044 (+)
G1289707 NA non-coding upstream 671 38592492 ~ 38592692 (+)
G1289700 NA non-coding upstream 7908 38584514 ~ 38585455 (+)
G1289696 NA non-coding upstream 22739 38570346 ~ 38570624 (+)
G1289678 NA non-coding upstream 115983 38477165 ~ 38477380 (+)
G1289740 NA non-coding downstream 36852 38630426 ~ 38630655 (+)
G1289855 NA non-coding downstream 211058 38804632 ~ 38809711 (+)
G1289875 NA non-coding downstream 247197 38840771 ~ 38840986 (+)
G1289910 NA non-coding downstream 291110 38884684 ~ 38884898 (+)
G1289912 NA non-coding downstream 293153 38886727 ~ 38886952 (+)
G1289491 NA other upstream 409360 38183436 ~ 38184003 (+)
G1287489 LOC106590045 other upstream 2082851 36509078 ~ 36510512 (+)
G1286648 LOC106590042 other upstream 2499967 36035583 ~ 36093396 (+)
G1284354 NA other upstream 4481092 34111807 ~ 34112271 (+)
G1282302 NA other upstream 5895327 32687558 ~ 32698036 (+)
G1289710 NA other downstream 1306 38594880 ~ 38600241 (+)
G1290549 LOC106590036 other downstream 443431 39037005 ~ 39061248 (+)
G1290614 NA other downstream 532698 39126272 ~ 39127009 (+)
G1291464 NA other downstream 1473984 40067558 ~ 40067907 (+)
LOC110490048 il-1racp other downstream 1526695 40089464 ~ 40132600 (+)

Expression



Co-expression Network