Gene
RNA
| Item | Value |
|---|---|
| gene id | G1289855 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 38804632 ~ 38809711 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1472060 | False | 428 | lncRNA | 0.46 | 2 | 38804632 | 38809711 |
| TU1472061 | True | 428 | lncRNA | 0.46 | 2 | 38804632 | 38809711 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490039 | LOC106590018 | coding | upstream | 223876 | 38576635 ~ 38580756 (+) |
| LOC110490038 | LOC106590019 | coding | upstream | 236153 | 38494289 ~ 38568479 (+) |
| LOC110490034 | rab18 | coding | upstream | 766607 | 38018211 ~ 38038025 (+) |
| LOC110490033 | LOC106590025 | coding | upstream | 786644 | 37974722 ~ 38017988 (+) |
| nrp1a | LOC106590027 | coding | upstream | 844039 | 37847266 ~ 37960593 (+) |
| LOC110490723 | LOC106612786 | coding | downstream | 45539 | 38855250 ~ 38856108 (+) |
| LOC110490726 | LOC106600248 | coding | downstream | 273103 | 39082814 ~ 39084700 (+) |
| LOC110490841 | NA | coding | downstream | 278362 | 39086859 ~ 39089636 (+) |
| brca2 | NA | coding | downstream | 737633 | 39547344 ~ 39589108 (+) |
| LOC110490049 | LOC106612364 | coding | downstream | 839659 | 39649370 ~ 39684044 (+) |
| G1289740 | NA | non-coding | upstream | 173977 | 38630426 ~ 38630655 (+) |
| G1289708 | NA | non-coding | upstream | 211058 | 38593363 ~ 38593574 (+) |
| G1289707 | NA | non-coding | upstream | 211940 | 38592492 ~ 38592692 (+) |
| G1289700 | NA | non-coding | upstream | 219177 | 38584514 ~ 38585455 (+) |
| G1289696 | NA | non-coding | upstream | 234008 | 38570346 ~ 38570624 (+) |
| G1289875 | NA | non-coding | downstream | 31060 | 38840771 ~ 38840986 (+) |
| G1289910 | NA | non-coding | downstream | 74973 | 38884684 ~ 38884898 (+) |
| G1289912 | NA | non-coding | downstream | 77016 | 38886727 ~ 38886952 (+) |
| G1289920 | NA | non-coding | downstream | 89040 | 38898751 ~ 38899051 (+) |
| G1289928 | NA | non-coding | downstream | 106356 | 38916067 ~ 38916455 (+) |
| G1289710 | NA | other | upstream | 204391 | 38594880 ~ 38600241 (+) |
| G1289491 | NA | other | upstream | 620629 | 38183436 ~ 38184003 (+) |
| G1287489 | LOC106590045 | other | upstream | 2294120 | 36509078 ~ 36510512 (+) |
| G1286648 | LOC106590042 | other | upstream | 2711236 | 36035583 ~ 36093396 (+) |
| G1284354 | NA | other | upstream | 4692361 | 34111807 ~ 34112271 (+) |
| G1290549 | LOC106590036 | other | downstream | 227294 | 39037005 ~ 39061248 (+) |
| G1290614 | NA | other | downstream | 316561 | 39126272 ~ 39127009 (+) |
| G1291464 | NA | other | downstream | 1257847 | 40067558 ~ 40067907 (+) |
| LOC110490048 | il-1racp | other | downstream | 1310558 | 40089464 ~ 40132600 (+) |
| G1293072 | NA | other | downstream | 2773662 | 41583216 ~ 41589030 (+) |
