G1289920


Basic Information

Item Value
gene id G1289920
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 38898751 ~ 38899051 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1472127
gtacatgtccaggcctgtctgaagtttgctagagagcatttggatgatccagaagaagattgggagaatgtcatatggtcagatgaaaccaaaatagaactttttggtaaaaactcaactcgtcgtgtttggaggacaaagaatgctgagttgcatccaaagaacaccatacctactgtgaagcatgggggtggaaacatcatgctttggggcagtttttctgcaaagggtccAGGActactgatccgtgtaaaggaaagaatgaatggggccatgtatcgtgagattttgagtgttAACC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1472127 True 301 lncRNA 0.44 1 38898751 38899051

Neighbor

gene id symbol gene type direction distance location
LOC110490723 LOC106612786 coding upstream 42643 38855250 ~ 38856108 (+)
LOC110490039 LOC106590018 coding upstream 317995 38576635 ~ 38580756 (+)
LOC110490038 LOC106590019 coding upstream 330272 38494289 ~ 38568479 (+)
LOC110490034 rab18 coding upstream 860726 38018211 ~ 38038025 (+)
LOC110490033 LOC106590025 coding upstream 880763 37974722 ~ 38017988 (+)
LOC110490726 LOC106600248 coding downstream 183763 39082814 ~ 39084700 (+)
LOC110490841 NA coding downstream 189022 39086859 ~ 39089636 (+)
brca2 NA coding downstream 648293 39547344 ~ 39589108 (+)
LOC110490049 LOC106612364 coding downstream 750319 39649370 ~ 39684044 (+)
LOC110490050 LOC106612350 coding downstream 1013391 39845713 ~ 39929225 (+)
G1289912 NA non-coding upstream 11799 38886727 ~ 38886952 (+)
G1289910 NA non-coding upstream 13853 38884684 ~ 38884898 (+)
G1289875 NA non-coding upstream 57765 38840771 ~ 38840986 (+)
G1289855 NA non-coding upstream 89040 38804632 ~ 38809711 (+)
G1289740 NA non-coding upstream 268096 38630426 ~ 38630655 (+)
G1289928 NA non-coding downstream 17016 38916067 ~ 38916455 (+)
G1289929 NA non-coding downstream 18192 38917243 ~ 38917553 (+)
G1290478 NA non-coding downstream 26660 38925711 ~ 38925913 (+)
G1290487 NA non-coding downstream 34190 38933241 ~ 38933446 (+)
G1290488 NA non-coding downstream 34716 38933767 ~ 38934215 (+)
G1289710 NA other upstream 298510 38594880 ~ 38600241 (+)
G1289491 NA other upstream 714748 38183436 ~ 38184003 (+)
G1287489 LOC106590045 other upstream 2388239 36509078 ~ 36510512 (+)
G1286648 LOC106590042 other upstream 2805355 36035583 ~ 36093396 (+)
G1284354 NA other upstream 4786480 34111807 ~ 34112271 (+)
G1290549 LOC106590036 other downstream 137954 39037005 ~ 39061248 (+)
G1290614 NA other downstream 227221 39126272 ~ 39127009 (+)
G1291464 NA other downstream 1168507 40067558 ~ 40067907 (+)
LOC110490048 il-1racp other downstream 1221218 40089464 ~ 40132600 (+)
G1293072 NA other downstream 2684322 41583216 ~ 41589030 (+)

Expression


Co-expression Network