G1290523


Basic Information

Item Value
gene id G1290523
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 38965250 ~ 38965697 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1472757
aggtgttggctttggggatgaccagtgaaatatacctgctggggtgggtgttgctatggtgaccagtgagatgaaATAAGGTGGGgcattacctagcaaagacttatagataacctggagccagtgggtttggcgacaaatatgtagcgaggaccagccaacgagagcatacaggtcgcaatggtgggtagtataaggggctttggtgacaaaacggatggcactgtgatagactgcatccaatttgttgagtagagtgctggaggctattttgtaaatgacatcgaagTCGAAGAtaggcaggatagtcagttttacgagggtatgtttggcagcttgagtgaaggaagctttgttgcgaaataggaagccgattctagataacattttggattggagatgcttaatatgagtctggaagaagagttcacagtctaggtatttatag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1472757 True 448 lncRNA 0.45 1 38965250 38965697

Neighbor

gene id symbol gene type direction distance location
LOC110490723 LOC106612786 coding upstream 109142 38855250 ~ 38856108 (+)
LOC110490039 LOC106590018 coding upstream 384494 38576635 ~ 38580756 (+)
LOC110490038 LOC106590019 coding upstream 396771 38494289 ~ 38568479 (+)
LOC110490034 rab18 coding upstream 927225 38018211 ~ 38038025 (+)
LOC110490033 LOC106590025 coding upstream 947262 37974722 ~ 38017988 (+)
LOC110490726 LOC106600248 coding downstream 117117 39082814 ~ 39084700 (+)
LOC110490841 NA coding downstream 122376 39086859 ~ 39089636 (+)
brca2 NA coding downstream 581647 39547344 ~ 39589108 (+)
LOC110490049 LOC106612364 coding downstream 683673 39649370 ~ 39684044 (+)
LOC110490050 LOC106612350 coding downstream 946745 39845713 ~ 39929225 (+)
G1290522 NA non-coding upstream 141 38964895 ~ 38965109 (+)
G1290521 NA non-coding upstream 1325 38963684 ~ 38963925 (+)
G1290520 NA non-coding upstream 3983 38960768 ~ 38961267 (+)
G1290518 NA non-coding upstream 7054 38957945 ~ 38958196 (+)
G1290509 NA non-coding upstream 17905 38947112 ~ 38947345 (+)
G1290526 NA non-coding downstream 1421 38967118 ~ 38967525 (+)
G1290529 NA non-coding downstream 4977 38970674 ~ 38970907 (+)
G1290536 NA non-coding downstream 21582 38987279 ~ 38987542 (+)
G1290559 NA non-coding downstream 58652 39024349 ~ 39030630 (+)
G1290550 zc3hf non-coding downstream 61545 39027242 ~ 39033420 (+)
G1289710 NA other upstream 365009 38594880 ~ 38600241 (+)
G1289491 NA other upstream 781247 38183436 ~ 38184003 (+)
G1287489 LOC106590045 other upstream 2454738 36509078 ~ 36510512 (+)
G1286648 LOC106590042 other upstream 2871854 36035583 ~ 36093396 (+)
G1284354 NA other upstream 4852979 34111807 ~ 34112271 (+)
G1290549 LOC106590036 other downstream 71308 39037005 ~ 39061248 (+)
G1290614 NA other downstream 160575 39126272 ~ 39127009 (+)
G1291464 NA other downstream 1101861 40067558 ~ 40067907 (+)
LOC110490048 il-1racp other downstream 1154572 40089464 ~ 40132600 (+)
G1293072 NA other downstream 2617676 41583216 ~ 41589030 (+)

Expression


Co-expression Network