Gene
RNA
| Item | Value |
|---|---|
| gene id | G1290536 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 38987279 ~ 38987542 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1472770 | True | 264 | lncRNA | 0.32 | 1 | 38987279 | 38987542 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490723 | LOC106612786 | coding | upstream | 131171 | 38855250 ~ 38856108 (+) |
| LOC110490039 | LOC106590018 | coding | upstream | 406523 | 38576635 ~ 38580756 (+) |
| LOC110490038 | LOC106590019 | coding | upstream | 418800 | 38494289 ~ 38568479 (+) |
| LOC110490034 | rab18 | coding | upstream | 949254 | 38018211 ~ 38038025 (+) |
| LOC110490033 | LOC106590025 | coding | upstream | 969291 | 37974722 ~ 38017988 (+) |
| LOC110490726 | LOC106600248 | coding | downstream | 95272 | 39082814 ~ 39084700 (+) |
| LOC110490841 | NA | coding | downstream | 100531 | 39086859 ~ 39089636 (+) |
| brca2 | NA | coding | downstream | 559802 | 39547344 ~ 39589108 (+) |
| LOC110490049 | LOC106612364 | coding | downstream | 661828 | 39649370 ~ 39684044 (+) |
| LOC110490050 | LOC106612350 | coding | downstream | 924900 | 39845713 ~ 39929225 (+) |
| G1290529 | NA | non-coding | upstream | 16372 | 38970674 ~ 38970907 (+) |
| G1290526 | NA | non-coding | upstream | 19754 | 38967118 ~ 38967525 (+) |
| G1290523 | NA | non-coding | upstream | 21582 | 38965250 ~ 38965697 (+) |
| G1290522 | NA | non-coding | upstream | 22170 | 38964895 ~ 38965109 (+) |
| G1290521 | NA | non-coding | upstream | 23354 | 38963684 ~ 38963925 (+) |
| G1290559 | NA | non-coding | downstream | 36807 | 39024349 ~ 39030630 (+) |
| G1290550 | zc3hf | non-coding | downstream | 39700 | 39027242 ~ 39033420 (+) |
| G1290549 | LOC106590036 | non-coding | downstream | 49885 | 39037005 ~ 39061248 (+) |
| G1290613 | NA | non-coding | downstream | 135139 | 39122681 ~ 39123073 (+) |
| G1289710 | NA | other | upstream | 387038 | 38594880 ~ 38600241 (+) |
| G1289491 | NA | other | upstream | 803276 | 38183436 ~ 38184003 (+) |
| G1287489 | LOC106590045 | other | upstream | 2476767 | 36509078 ~ 36510512 (+) |
| G1286648 | LOC106590042 | other | upstream | 2893883 | 36035583 ~ 36093396 (+) |
| G1284354 | NA | other | upstream | 4875008 | 34111807 ~ 34112271 (+) |
| G1290614 | NA | other | downstream | 138730 | 39126272 ~ 39127009 (+) |
| G1291464 | NA | other | downstream | 1080016 | 40067558 ~ 40067907 (+) |
| LOC110490048 | il-1racp | other | downstream | 1132727 | 40089464 ~ 40132600 (+) |
| G1293072 | NA | other | downstream | 2595831 | 41583216 ~ 41589030 (+) |
