G1290724


Basic Information

Item Value
gene id G1290724
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 39552805 ~ 39553148 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1473048
gaagcatggtggtggcagcatcatgctgttggcgTGTTATttaggggcagggactgggagactaatcaggattgaggctaagatgaactgagcaaagtacagagagatccttgagaaaacgtgctccagagcgctcaagacctcagactggggcgaaggttcaccttccaacaggacaacgaccctaagcacacagccaagacaacgcaggaatggcttcgggacaagtctctgaatgtccttgaatggcccagccagagcccggacttgaacccaacctaacatctctggagagacctgaaaatagctgtgcagcaacgctcctcatccaacctaacagagct

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1473048 True 344 lncRNA 0.52 1 39552805 39553148

Neighbor

gene id symbol gene type direction distance location
LOC110490841 NA coding upstream 463169 39086859 ~ 39089636 (+)
LOC110490726 LOC106600248 coding upstream 468105 39082814 ~ 39084700 (+)
LOC110490723 LOC106612786 coding upstream 696697 38855250 ~ 38856108 (+)
LOC110490039 LOC106590018 coding upstream 972049 38576635 ~ 38580756 (+)
LOC110490038 LOC106590019 coding upstream 984326 38494289 ~ 38568479 (+)
LOC110490049 LOC106612364 coding downstream 96222 39649370 ~ 39684044 (+)
LOC110490050 LOC106612350 coding downstream 359294 39845713 ~ 39929225 (+)
LOC110490053 fgf12 coding downstream 383738 39936886 ~ 40053076 (+)
LOC110490048 il-1racp coding downstream 536316 40089464 ~ 40132600 (+)
tfdp2 LOC105026801 coding downstream 1477228 41030376 ~ 41088538 (+)
G1290723 NA non-coding upstream 2748 39549487 ~ 39550057 (+)
brca2 NA non-coding upstream 4415 39547344 ~ 39589108 (+)
G1290719 NA non-coding upstream 7485 39544939 ~ 39545320 (+)
G1290718 NA non-coding upstream 8268 39544178 ~ 39544537 (+)
G1290717 NA non-coding upstream 11624 39540900 ~ 39541181 (+)
G1290735 NA non-coding downstream 50327 39603475 ~ 39603869 (+)
G1290739 NA non-coding downstream 55349 39608497 ~ 39608931 (+)
G1290749 NA non-coding downstream 68483 39621631 ~ 39621875 (+)
G1290854 NA non-coding downstream 257689 39810837 ~ 39811038 (+)
G1290856 NA non-coding downstream 261776 39814924 ~ 39815258 (+)
G1290614 NA other upstream 425796 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 515146 39037005 ~ 39061248 (+)
G1289710 NA other upstream 952564 38594880 ~ 38600241 (+)
G1289491 NA other upstream 1368802 38183436 ~ 38184003 (+)
G1287489 LOC106590045 other upstream 3042293 36509078 ~ 36510512 (+)
G1291464 NA other downstream 514410 40067558 ~ 40067907 (+)
G1293072 NA other downstream 2030225 41583216 ~ 41589030 (+)
G1293295 NA other downstream 2355886 41909034 ~ 41909611 (+)
G1294319 NA other downstream 3211705 42764853 ~ 42767937 (+)

Expression


Co-expression Network