G1290854


Basic Information

Item Value
gene id G1290854
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 39810837 ~ 39811038 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1473192
ccatattcctaacacacaatgattacatcaagctggTGActttacaaacttgttggatgtatttgcggtttgtttggttgtgtttcagattattttgaagCCCATAGAAATGAatagtaaataatgtattgtgttattttagagtaacttttattgtaaataagaatataatatgtttctaaacacttaatgtggatgctac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1473192 True 202 lncRNA 0.29 1 39810837 39811038

Neighbor

gene id symbol gene type direction distance location
LOC110490049 LOC106612364 coding upstream 126793 39649370 ~ 39684044 (+)
brca2 NA coding upstream 221729 39547344 ~ 39589108 (+)
LOC110490841 NA coding upstream 721201 39086859 ~ 39089636 (+)
LOC110490726 LOC106600248 coding upstream 726137 39082814 ~ 39084700 (+)
LOC110490723 LOC106612786 coding upstream 954729 38855250 ~ 38856108 (+)
LOC110490050 LOC106612350 coding downstream 101404 39845713 ~ 39929225 (+)
LOC110490053 fgf12 coding downstream 125848 39936886 ~ 40053076 (+)
LOC110490048 il-1racp coding downstream 278426 40089464 ~ 40132600 (+)
tfdp2 LOC105026801 coding downstream 1219338 41030376 ~ 41088538 (+)
LOC110490065 LOC106580667 coding downstream 1282492 41093530 ~ 41156857 (+)
G1290749 NA non-coding upstream 188962 39621631 ~ 39621875 (+)
G1290739 NA non-coding upstream 201906 39608497 ~ 39608931 (+)
G1290735 NA non-coding upstream 206968 39603475 ~ 39603869 (+)
G1290724 NA non-coding upstream 257689 39552805 ~ 39553148 (+)
G1290723 NA non-coding upstream 260780 39549487 ~ 39550057 (+)
G1290856 NA non-coding downstream 3886 39814924 ~ 39815258 (+)
G1290864 NA non-coding downstream 13928 39824966 ~ 39825165 (+)
G1290867 NA non-coding downstream 16420 39827458 ~ 39827684 (+)
G1290868 NA non-coding downstream 18060 39829098 ~ 39829301 (+)
G1290871 NA non-coding downstream 20287 39831325 ~ 39831613 (+)
G1290614 NA other upstream 683828 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 773178 39037005 ~ 39061248 (+)
G1289710 NA other upstream 1210596 38594880 ~ 38600241 (+)
G1289491 NA other upstream 1626834 38183436 ~ 38184003 (+)
G1287489 LOC106590045 other upstream 3300325 36509078 ~ 36510512 (+)
G1291464 NA other downstream 256520 40067558 ~ 40067907 (+)
G1293072 NA other downstream 1772335 41583216 ~ 41589030 (+)
G1293295 NA other downstream 2097996 41909034 ~ 41909611 (+)
G1294319 NA other downstream 2953815 42764853 ~ 42767937 (+)

Expression


Co-expression Network