G1290867


Basic Information

Item Value
gene id G1290867
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 39827458 ~ 39827684 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1473205
AGACATGAGGCATCGTATTTCTTGTGCttcgcagagctgttgtgaaggaatttgtcaaggaagtgagtttgcgTTTATACAAAACCTCCCTCCCACatctaccgtcaaccaatcatgtaaaTGCAGAGCTAAACAGACCTATAAaagccctccgcattgttacacAATTTGAGAGGCACACGGTGATGCGGTACGGAGCTCGATTTGGCATCCACAAGTCTCTGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1473205 True 227 lncRNA 0.46 1 39827458 39827684

Neighbor

gene id symbol gene type direction distance location
LOC110490049 LOC106612364 coding upstream 143414 39649370 ~ 39684044 (+)
brca2 NA coding upstream 238350 39547344 ~ 39589108 (+)
LOC110490841 NA coding upstream 737822 39086859 ~ 39089636 (+)
LOC110490726 LOC106600248 coding upstream 742758 39082814 ~ 39084700 (+)
LOC110490723 LOC106612786 coding upstream 971350 38855250 ~ 38856108 (+)
LOC110490050 LOC106612350 coding downstream 84758 39845713 ~ 39929225 (+)
LOC110490053 fgf12 coding downstream 109202 39936886 ~ 40053076 (+)
LOC110490048 il-1racp coding downstream 261780 40089464 ~ 40132600 (+)
tfdp2 LOC105026801 coding downstream 1202692 41030376 ~ 41088538 (+)
LOC110490065 LOC106580667 coding downstream 1265846 41093530 ~ 41156857 (+)
G1290864 NA non-coding upstream 2293 39824966 ~ 39825165 (+)
G1290856 NA non-coding upstream 12200 39814924 ~ 39815258 (+)
G1290854 NA non-coding upstream 16420 39810837 ~ 39811038 (+)
G1290749 NA non-coding upstream 205583 39621631 ~ 39621875 (+)
G1290739 NA non-coding upstream 218527 39608497 ~ 39608931 (+)
G1290868 NA non-coding downstream 1414 39829098 ~ 39829301 (+)
G1290871 NA non-coding downstream 3641 39831325 ~ 39831613 (+)
G1290874 NA non-coding downstream 5804 39833488 ~ 39833764 (+)
G1290880 NA non-coding downstream 12264 39839948 ~ 39840150 (+)
G1290614 NA other upstream 700449 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 789799 39037005 ~ 39061248 (+)
G1289710 NA other upstream 1227217 38594880 ~ 38600241 (+)
G1289491 NA other upstream 1643455 38183436 ~ 38184003 (+)
G1287489 LOC106590045 other upstream 3316946 36509078 ~ 36510512 (+)
G1291464 NA other downstream 239874 40067558 ~ 40067907 (+)
G1293072 NA other downstream 1755689 41583216 ~ 41589030 (+)
G1293295 NA other downstream 2081350 41909034 ~ 41909611 (+)
G1294319 NA other downstream 2937169 42764853 ~ 42767937 (+)

Expression


Co-expression Network