G1290874


Basic Information

Item Value
gene id G1290874
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 39833488 ~ 39833764 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1473212
cgttcatagatgaccagcagggtcaaataataatcacagtagttgtagggGGTGCAACctagagtaaatgtcagttgacttttcatagccgagcattcagaggtcaagacagcaggTGCGGCAGACAGcaggtccggtgaacaggtcagggttccattgcCACAAGCAGAACATttgaaactagagcagcagcatgaccaggtggactggggattgCCAGGAATcctcaggccaggtagtcctgaggcatgatcctagggcttaggtcctccgggag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1473212 True 277 lncRNA 0.52 1 39833488 39833764

Neighbor

gene id symbol gene type direction distance location
LOC110490049 LOC106612364 coding upstream 149444 39649370 ~ 39684044 (+)
brca2 NA coding upstream 244380 39547344 ~ 39589108 (+)
LOC110490841 NA coding upstream 743852 39086859 ~ 39089636 (+)
LOC110490726 LOC106600248 coding upstream 748788 39082814 ~ 39084700 (+)
LOC110490723 LOC106612786 coding upstream 977380 38855250 ~ 38856108 (+)
LOC110490050 LOC106612350 coding downstream 78678 39845713 ~ 39929225 (+)
LOC110490053 fgf12 coding downstream 103122 39936886 ~ 40053076 (+)
LOC110490048 il-1racp coding downstream 255700 40089464 ~ 40132600 (+)
tfdp2 LOC105026801 coding downstream 1196612 41030376 ~ 41088538 (+)
LOC110490065 LOC106580667 coding downstream 1259766 41093530 ~ 41156857 (+)
G1290871 NA non-coding upstream 1875 39831325 ~ 39831613 (+)
G1290868 NA non-coding upstream 4187 39829098 ~ 39829301 (+)
G1290867 NA non-coding upstream 5804 39827458 ~ 39827684 (+)
G1290864 NA non-coding upstream 8323 39824966 ~ 39825165 (+)
G1290856 NA non-coding upstream 18230 39814924 ~ 39815258 (+)
G1290880 NA non-coding downstream 6184 39839948 ~ 39840150 (+)
G1290883 NA non-coding downstream 36069 39869833 ~ 39874630 (+)
G1290849 NA non-coding downstream 51859 39885623 ~ 39894862 (+)
G1290614 NA other upstream 706479 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 795829 39037005 ~ 39061248 (+)
G1289710 NA other upstream 1233247 38594880 ~ 38600241 (+)
G1289491 NA other upstream 1649485 38183436 ~ 38184003 (+)
G1287489 LOC106590045 other upstream 3322976 36509078 ~ 36510512 (+)
G1291464 NA other downstream 233794 40067558 ~ 40067907 (+)
G1293072 NA other downstream 1749609 41583216 ~ 41589030 (+)
G1293295 NA other downstream 2075270 41909034 ~ 41909611 (+)
G1294319 NA other downstream 2931089 42764853 ~ 42767937 (+)

Expression


Co-expression Network