G1291488


Basic Information

Item Value
gene id G1291488
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 40081702 ~ 40082048 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1473903
TTAAAAtatttgtgagaagatgaaaTATGACGTTAGCCTTCTTAATGAGAATTGTTTTTCATATAAAAGTTCTACCCTGTCAGTGACCACACCCATGTGAGCATTATGTTGGCGTCATGGAATGCCCCCTTTTGCCAGAGTGCATAAAACCCCTCCTAACGAAATTTACATTAGACCAAGCAGGCGGACGGGTGTTGAACCGGACGTCACGAATGTTCAGACTCTATGAGACCAGAAAAACGTGGACCATGGCTGCACGATGATACGATGAGCGTATTATTTAACTGTATGTCTCTTCTTCCACTCTTTCTTACATGCCCCTCCATTTTCATTTTTGTAACAAGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1473903 True 347 lncRNA 0.42 1 40081702 40082048

Neighbor

gene id symbol gene type direction distance location
LOC110490053 fgf12 coding upstream 28626 39936886 ~ 40053076 (+)
LOC110490050 LOC106612350 coding upstream 152477 39845713 ~ 39929225 (+)
LOC110490049 LOC106612364 coding upstream 397658 39649370 ~ 39684044 (+)
brca2 NA coding upstream 492594 39547344 ~ 39589108 (+)
LOC110490841 NA coding upstream 992066 39086859 ~ 39089636 (+)
LOC110490048 il-1racp coding downstream 7416 40089464 ~ 40132600 (+)
tfdp2 LOC105026801 coding downstream 948328 41030376 ~ 41088538 (+)
LOC110490065 LOC106580667 coding downstream 1011482 41093530 ~ 41156857 (+)
trnap-ugg-11 NA coding downstream 1154938 41236986 ~ 41237057 (+)
trnap-ugg-12 NA coding downstream 1156808 41238856 ~ 41238927 (+)
G1291485 NA non-coding upstream 2956 40078423 ~ 40078746 (+)
G1291466 NA non-coding upstream 12876 40068481 ~ 40068826 (+)
G1291457 NA non-coding upstream 17212 40064270 ~ 40064490 (+)
G1291447 NA non-coding upstream 22518 40058958 ~ 40059184 (+)
G1291490 NA non-coding downstream 897 40082945 ~ 40083144 (+)
G1291515 NA non-coding downstream 52992 40135040 ~ 40142599 (+)
G1291602 NA non-coding downstream 187812 40269860 ~ 40321056 (+)
G1291758 NA non-coding downstream 423617 40505665 ~ 40506117 (+)
G1292084 NA non-coding downstream 482221 40564269 ~ 40564502 (+)
G1291464 NA other upstream 13795 40067558 ~ 40067907 (+)
G1290614 NA other upstream 954693 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 1044043 39037005 ~ 39061248 (+)
G1289710 NA other upstream 1481461 38594880 ~ 38600241 (+)
G1289491 NA other upstream 1897699 38183436 ~ 38184003 (+)
G1293072 NA other downstream 1501325 41583216 ~ 41589030 (+)
G1293295 NA other downstream 1826986 41909034 ~ 41909611 (+)
G1294319 NA other downstream 2682805 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 3514876 43596924 ~ 43597464 (+)

Expression


Co-expression Network