G1291758


Basic Information

Item Value
gene id G1291758
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 40505665 ~ 40506117 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1474197
CTTTCTATAGGTACACCAATCTGTAGAGAGCTGACTAGCTCTACTTTCTATAGGTACGCCAATCTGTAGAGAGCTCTGAAGTAATTGACAAGTCTGTATGgcccatatacacactcacagtgCACTCCTTTATGAACTCAACCTGTGAATGATTAAGCATCCATTTACAATTTTCACAAAACATTTATATAATTTGAGTGTTTTCTGTCGCTTGTATATGGACTCTATCCATAGATCTTCTCTAGATTGTTATGAAACGCGGTCCACTTTGTCAAAATAATAAAGTCACGAACATCAGACCTGGCGAATGGATGATTAAAGCTTTTTATTTAGCATGGTGTTATGATTGAATAGTTCTTTCAACAGCTATTTATAAGTTAGTGATATAACGTTGAAGCAGAAGGAATTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1474197 True 410 lncRNA 0.36 2 40505665 40506117

Neighbor

gene id symbol gene type direction distance location
LOC110490048 il-1racp coding upstream 373065 40089464 ~ 40132600 (+)
LOC110490053 fgf12 coding upstream 452589 39936886 ~ 40053076 (+)
LOC110490050 LOC106612350 coding upstream 576440 39845713 ~ 39929225 (+)
LOC110490049 LOC106612364 coding upstream 821621 39649370 ~ 39684044 (+)
brca2 NA coding upstream 916557 39547344 ~ 39589108 (+)
tfdp2 LOC105026801 coding downstream 524259 41030376 ~ 41088538 (+)
LOC110490065 LOC106580667 coding downstream 587413 41093530 ~ 41156857 (+)
trnap-ugg-11 NA coding downstream 730869 41236986 ~ 41237057 (+)
trnap-ugg-12 NA coding downstream 732739 41238856 ~ 41238927 (+)
trnap-ugg-13 NA coding downstream 733674 41239791 ~ 41239862 (+)
G1291602 NA non-coding upstream 184609 40269860 ~ 40321056 (+)
G1291515 NA non-coding upstream 363066 40135040 ~ 40142599 (+)
G1291490 NA non-coding upstream 422521 40082945 ~ 40083144 (+)
G1291488 NA non-coding upstream 423617 40081702 ~ 40082048 (+)
G1291485 NA non-coding upstream 426919 40078423 ~ 40078746 (+)
G1292084 NA non-coding downstream 58152 40564269 ~ 40564502 (+)
G1292092 NA non-coding downstream 62866 40568983 ~ 40569186 (+)
G1292107 NA non-coding downstream 74552 40580669 ~ 40580909 (+)
G1292160 NA non-coding downstream 112999 40619116 ~ 40619334 (+)
G1292165 NA non-coding downstream 122802 40628919 ~ 40629161 (+)
G1291464 NA other upstream 437758 40067558 ~ 40067907 (+)
G1290614 NA other upstream 1378656 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 1468006 39037005 ~ 39061248 (+)
G1289710 NA other upstream 1905424 38594880 ~ 38600241 (+)
G1293072 NA other downstream 1077256 41583216 ~ 41589030 (+)
G1293295 NA other downstream 1402917 41909034 ~ 41909611 (+)
G1294319 NA other downstream 2258736 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 3090807 43596924 ~ 43597464 (+)
G1295730 NA other downstream 3410061 43916178 ~ 43916479 (+)

Expression


Co-expression Network