Gene
RNA
| Item | Value |
|---|---|
| gene id | G1292165 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 40628919 ~ 40629161 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1474622 | True | 243 | lncRNA | 0.44 | 1 | 40628919 | 40629161 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490048 | il-1racp | coding | upstream | 496319 | 40089464 ~ 40132600 (+) |
| LOC110490053 | fgf12 | coding | upstream | 575843 | 39936886 ~ 40053076 (+) |
| LOC110490050 | LOC106612350 | coding | upstream | 699694 | 39845713 ~ 39929225 (+) |
| LOC110490049 | LOC106612364 | coding | upstream | 944875 | 39649370 ~ 39684044 (+) |
| brca2 | NA | coding | upstream | 1039811 | 39547344 ~ 39589108 (+) |
| tfdp2 | LOC105026801 | coding | downstream | 401215 | 41030376 ~ 41088538 (+) |
| LOC110490065 | LOC106580667 | coding | downstream | 464369 | 41093530 ~ 41156857 (+) |
| trnap-ugg-11 | NA | coding | downstream | 607825 | 41236986 ~ 41237057 (+) |
| trnap-ugg-12 | NA | coding | downstream | 609695 | 41238856 ~ 41238927 (+) |
| trnap-ugg-13 | NA | coding | downstream | 610630 | 41239791 ~ 41239862 (+) |
| G1292160 | NA | non-coding | upstream | 9585 | 40619116 ~ 40619334 (+) |
| G1292107 | NA | non-coding | upstream | 48010 | 40580669 ~ 40580909 (+) |
| G1292092 | NA | non-coding | upstream | 59733 | 40568983 ~ 40569186 (+) |
| G1292084 | NA | non-coding | upstream | 64417 | 40564269 ~ 40564502 (+) |
| G1291758 | NA | non-coding | upstream | 122802 | 40505665 ~ 40506117 (+) |
| G1292168 | NA | non-coding | downstream | 1908 | 40631069 ~ 40631288 (+) |
| G1292170 | NA | non-coding | downstream | 4020 | 40633181 ~ 40633429 (+) |
| G1292171 | NA | non-coding | downstream | 6282 | 40635443 ~ 40635653 (+) |
| G1292172 | NA | non-coding | downstream | 9217 | 40638378 ~ 40638607 (+) |
| G1292175 | NA | non-coding | downstream | 11086 | 40640247 ~ 40640490 (+) |
| G1291464 | NA | other | upstream | 561012 | 40067558 ~ 40067907 (+) |
| G1290614 | NA | other | upstream | 1501910 | 39126272 ~ 39127009 (+) |
| G1290549 | LOC106590036 | other | upstream | 1591260 | 39037005 ~ 39061248 (+) |
| G1289710 | NA | other | upstream | 2028678 | 38594880 ~ 38600241 (+) |
| G1293072 | NA | other | downstream | 954212 | 41583216 ~ 41589030 (+) |
| G1293295 | NA | other | downstream | 1279873 | 41909034 ~ 41909611 (+) |
| G1294319 | NA | other | downstream | 2135692 | 42764853 ~ 42767937 (+) |
| G1295348 | LOC106602853 | other | downstream | 2967763 | 43596924 ~ 43597464 (+) |
| G1295730 | NA | other | downstream | 3287017 | 43916178 ~ 43916479 (+) |
