G1292182


Basic Information

Item Value
gene id G1292182
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 40647526 ~ 40647887 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1474639
ctctaagagctttgcacatgtGGATTGTTCAATATTTGACCGTTATtctttaaattcttcaagctctgtcaaattggttgttgatcattggcaTAGATTTTCAAGAAGATTTAAGGCAAAACTGTAACACcctggaacattcactgtcttcttggtaagcaactagtgtggatttggccttgtgttttaggttattgtccagctgaagggtgaattaatctcccagtgtctggtaaaAAGCAGACTGGACCAAGTTTTCCTCaatgattttgcctgtgtttagctccattccgtttattttttatgcTGAAAAACTCCAGTTCTTAACGACTacaagaatacccataacatgatgcagccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1474639 True 362 lncRNA 0.38 1 40647526 40647887

Neighbor

gene id symbol gene type direction distance location
LOC110490048 il-1racp coding upstream 514926 40089464 ~ 40132600 (+)
LOC110490053 fgf12 coding upstream 594450 39936886 ~ 40053076 (+)
LOC110490050 LOC106612350 coding upstream 718301 39845713 ~ 39929225 (+)
LOC110490049 LOC106612364 coding upstream 963482 39649370 ~ 39684044 (+)
brca2 NA coding upstream 1058418 39547344 ~ 39589108 (+)
tfdp2 LOC105026801 coding downstream 382489 41030376 ~ 41088538 (+)
LOC110490065 LOC106580667 coding downstream 445643 41093530 ~ 41156857 (+)
trnap-ugg-11 NA coding downstream 589099 41236986 ~ 41237057 (+)
trnap-ugg-12 NA coding downstream 590969 41238856 ~ 41238927 (+)
trnap-ugg-13 NA coding downstream 591904 41239791 ~ 41239862 (+)
G1292181 NA non-coding upstream 616 40646657 ~ 40646910 (+)
G1292178 NA non-coding upstream 3058 40644214 ~ 40644468 (+)
G1292175 NA non-coding upstream 7036 40640247 ~ 40640490 (+)
G1292172 NA non-coding upstream 8919 40638378 ~ 40638607 (+)
G1292171 NA non-coding upstream 11873 40635443 ~ 40635653 (+)
G1292184 NA non-coding downstream 2489 40650376 ~ 40650583 (+)
G1292185 NA non-coding downstream 4625 40652512 ~ 40652854 (+)
G1292192 NA non-coding downstream 11786 40659673 ~ 40659936 (+)
G1292202 irs1 non-coding downstream 25782 40673669 ~ 40674900 (+)
G1292208 NA non-coding downstream 38044 40685931 ~ 40686247 (+)
G1291464 NA other upstream 579619 40067558 ~ 40067907 (+)
G1290614 NA other upstream 1520517 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 1609867 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2047285 38594880 ~ 38600241 (+)
G1293072 NA other downstream 935486 41583216 ~ 41589030 (+)
G1293295 NA other downstream 1261147 41909034 ~ 41909611 (+)
G1294319 NA other downstream 2116966 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2949037 43596924 ~ 43597464 (+)
G1295730 NA other downstream 3268291 43916178 ~ 43916479 (+)

Expression


Co-expression Network