G1292184


Basic Information

Item Value
gene id G1292184
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 40650376 ~ 40650583 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1474641
GGTTCACCGAGCTGCGAGTCAAGAGAGGCAGGCTCAAAGACCCAGAGAGACAGTCCAGCCCCATAACTTGGAATCCGTCCATCTTTGGAAAAAGTGATGGCGACATCAACGTAGTCACTACATTAAAGTTCTGTGGCTATATAAAACTAGAACAACAGTTGAGGGGAATCAATGTGTGAACCCTTGGTCAAGCAATCTAATTGAACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1474641 True 208 lncRNA 0.46 1 40650376 40650583

Neighbor

gene id symbol gene type direction distance location
LOC110490048 il-1racp coding upstream 517776 40089464 ~ 40132600 (+)
LOC110490053 fgf12 coding upstream 597300 39936886 ~ 40053076 (+)
LOC110490050 LOC106612350 coding upstream 721151 39845713 ~ 39929225 (+)
LOC110490049 LOC106612364 coding upstream 966332 39649370 ~ 39684044 (+)
brca2 NA coding upstream 1061268 39547344 ~ 39589108 (+)
tfdp2 LOC105026801 coding downstream 379793 41030376 ~ 41088538 (+)
LOC110490065 LOC106580667 coding downstream 442947 41093530 ~ 41156857 (+)
trnap-ugg-11 NA coding downstream 586403 41236986 ~ 41237057 (+)
trnap-ugg-12 NA coding downstream 588273 41238856 ~ 41238927 (+)
trnap-ugg-13 NA coding downstream 589208 41239791 ~ 41239862 (+)
G1292182 NA non-coding upstream 2489 40647526 ~ 40647887 (+)
G1292181 NA non-coding upstream 3466 40646657 ~ 40646910 (+)
G1292178 NA non-coding upstream 5908 40644214 ~ 40644468 (+)
G1292175 NA non-coding upstream 9886 40640247 ~ 40640490 (+)
G1292172 NA non-coding upstream 11769 40638378 ~ 40638607 (+)
G1292185 NA non-coding downstream 1929 40652512 ~ 40652854 (+)
G1292192 NA non-coding downstream 9090 40659673 ~ 40659936 (+)
G1292202 irs1 non-coding downstream 23086 40673669 ~ 40674900 (+)
G1292208 NA non-coding downstream 35348 40685931 ~ 40686247 (+)
G1292212 NA non-coding downstream 42960 40693543 ~ 40693766 (+)
G1291464 NA other upstream 582469 40067558 ~ 40067907 (+)
G1290614 NA other upstream 1523367 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 1612717 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2050135 38594880 ~ 38600241 (+)
G1293072 NA other downstream 932790 41583216 ~ 41589030 (+)
G1293295 NA other downstream 1258451 41909034 ~ 41909611 (+)
G1294319 NA other downstream 2114270 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2946341 43596924 ~ 43597464 (+)
G1295730 NA other downstream 3265595 43916178 ~ 43916479 (+)

Expression


Co-expression Network