G1292214


Basic Information

Item Value
gene id G1292214
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 40698239 ~ 40698451 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1474671
CAgaatttaaattttattttgtaaattcATTCACGTTCAACTCCCACATTACTGATCCAGTATTGATGGTCCATTAACGTCTTTAAATAGATTAAAATCTTCTTTGCAGATTCTACTCACTCAAAACCCAATTCCTCCTTTAAAAGGTTTGTCCTACTGCAGCACACCCTGCATGCTGCTGCAGCAATCTGTGGCACGTCAtgtaaaacttct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1474671 True 213 lncRNA 0.37 1 40698239 40698451

Neighbor

gene id symbol gene type direction distance location
LOC110490048 il-1racp coding upstream 565639 40089464 ~ 40132600 (+)
LOC110490053 fgf12 coding upstream 645163 39936886 ~ 40053076 (+)
LOC110490050 LOC106612350 coding upstream 769014 39845713 ~ 39929225 (+)
LOC110490049 LOC106612364 coding upstream 1014195 39649370 ~ 39684044 (+)
brca2 NA coding upstream 1109131 39547344 ~ 39589108 (+)
tfdp2 LOC105026801 coding downstream 331925 41030376 ~ 41088538 (+)
LOC110490065 LOC106580667 coding downstream 395079 41093530 ~ 41156857 (+)
trnap-ugg-11 NA coding downstream 538535 41236986 ~ 41237057 (+)
trnap-ugg-12 NA coding downstream 540405 41238856 ~ 41238927 (+)
trnap-ugg-13 NA coding downstream 541340 41239791 ~ 41239862 (+)
G1292213 NA non-coding upstream 1437 40694800 ~ 40696802 (+)
G1292212 NA non-coding upstream 4473 40693543 ~ 40693766 (+)
G1292208 NA non-coding upstream 11992 40685931 ~ 40686247 (+)
G1292202 irs1 non-coding upstream 23339 40673669 ~ 40674900 (+)
G1292192 NA non-coding upstream 38303 40659673 ~ 40659936 (+)
G1292216 NA non-coding downstream 2857 40701308 ~ 40701593 (+)
G1292217 NA non-coding downstream 3833 40702284 ~ 40702591 (+)
G1292306 NA non-coding downstream 152884 40851335 ~ 40928127 (+)
G1292330 LOC106612419 non-coding downstream 190819 40889270 ~ 40891381 (+)
G1292372 NA non-coding downstream 251166 40949617 ~ 40955696 (+)
G1291464 NA other upstream 630332 40067558 ~ 40067907 (+)
G1290614 NA other upstream 1571230 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 1660580 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2097998 38594880 ~ 38600241 (+)
G1293072 NA other downstream 884922 41583216 ~ 41589030 (+)
G1293295 NA other downstream 1210583 41909034 ~ 41909611 (+)
G1294319 NA other downstream 2066402 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2898473 43596924 ~ 43597464 (+)
G1295730 NA other downstream 3217727 43916178 ~ 43916479 (+)

Expression


Co-expression Network