G1292216


Basic Information

Item Value
gene id G1292216
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 40701308 ~ 40701593 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1474673
ggcaaatctggtctgtgataggaGGCAGGGTTTTCACACCTAGCATGGCTATTAGACTATTCTTCAATAAAtgttgaatagtctattgttcagctattagccctcctcatcattctgctcctgagtggctcgcttgtgggcgtgctggAAGGGTGTGGCAGCATCTTCCGTTGTGCGTCAAGAATTCTGCATTACAGTAGCACGTTTGTGTGAAGGTGTGGTTATTCACAGGCAAATAGCAATACGATATGGGGGTACATTTGTGTCTTTTTGTCGAGAGGAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1474673 True 286 lncRNA 0.45 1 40701308 40701593

Neighbor

gene id symbol gene type direction distance location
LOC110490048 il-1racp coding upstream 568708 40089464 ~ 40132600 (+)
LOC110490053 fgf12 coding upstream 648232 39936886 ~ 40053076 (+)
LOC110490050 LOC106612350 coding upstream 772083 39845713 ~ 39929225 (+)
LOC110490049 LOC106612364 coding upstream 1017264 39649370 ~ 39684044 (+)
brca2 NA coding upstream 1112200 39547344 ~ 39589108 (+)
tfdp2 LOC105026801 coding downstream 328783 41030376 ~ 41088538 (+)
LOC110490065 LOC106580667 coding downstream 391937 41093530 ~ 41156857 (+)
trnap-ugg-11 NA coding downstream 535393 41236986 ~ 41237057 (+)
trnap-ugg-12 NA coding downstream 537263 41238856 ~ 41238927 (+)
trnap-ugg-13 NA coding downstream 538198 41239791 ~ 41239862 (+)
G1292214 NA non-coding upstream 2857 40698239 ~ 40698451 (+)
G1292213 NA non-coding upstream 4506 40694800 ~ 40696802 (+)
G1292212 NA non-coding upstream 7542 40693543 ~ 40693766 (+)
G1292208 NA non-coding upstream 15061 40685931 ~ 40686247 (+)
G1292202 irs1 non-coding upstream 26408 40673669 ~ 40674900 (+)
G1292217 NA non-coding downstream 691 40702284 ~ 40702591 (+)
G1292306 NA non-coding downstream 149742 40851335 ~ 40928127 (+)
G1292330 LOC106612419 non-coding downstream 187677 40889270 ~ 40891381 (+)
G1292372 NA non-coding downstream 248024 40949617 ~ 40955696 (+)
G1292380 NA non-coding downstream 262193 40963786 ~ 40967065 (+)
G1291464 NA other upstream 633401 40067558 ~ 40067907 (+)
G1290614 NA other upstream 1574299 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 1663649 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2101067 38594880 ~ 38600241 (+)
G1293072 NA other downstream 881780 41583216 ~ 41589030 (+)
G1293295 NA other downstream 1207441 41909034 ~ 41909611 (+)
G1294319 NA other downstream 2063260 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2895331 43596924 ~ 43597464 (+)
G1295730 NA other downstream 3214585 43916178 ~ 43916479 (+)

Expression


Co-expression Network