G1292372


Basic Information

Item Value
gene id G1292372
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 40949617 ~ 40955696 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1474838
gtttcttgacccaagcaagtctcttcttattattggtgttctttagtagtggtttctttgcagcaattcgaccatgaaggcctgattcctctgaacagttgatgttaagatgtgtctgttacttgaactctgtgaagcatttatttgggctgcaatttctgaggctggtaactaactTATTCtatgcagcagaagtaactctgggtcttcctttcctgtggcgtcatgagagccagttccaacattgcacttgatggttttacgactgcacttgcttatttgagctgttcttgctataatatggacttagtcctatttggtaaaagaccatcttctgtataacaccattacattgtcacaacacaattgattggatgaaacgcattaagaaggaaagaaattccacaaatgtacttttaacaaggcacacctgttagttggaatgctaagagtgtgcaaagctgtcatcaaggaaaaggttggctactttgaagaatctcaaatatatgttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1474838 True 512 lncRNA 0.39 2 40949617 40955696

Neighbor

gene id symbol gene type direction distance location
LOC110490048 il-1racp coding upstream 817017 40089464 ~ 40132600 (+)
LOC110490053 fgf12 coding upstream 896541 39936886 ~ 40053076 (+)
LOC110490050 LOC106612350 coding upstream 1020392 39845713 ~ 39929225 (+)
LOC110490049 LOC106612364 coding upstream 1265573 39649370 ~ 39684044 (+)
brca2 NA coding upstream 1360509 39547344 ~ 39589108 (+)
tfdp2 LOC105026801 coding downstream 74680 41030376 ~ 41088538 (+)
LOC110490065 LOC106580667 coding downstream 137834 41093530 ~ 41156857 (+)
trnap-ugg-11 NA coding downstream 281290 41236986 ~ 41237057 (+)
trnap-ugg-12 NA coding downstream 283160 41238856 ~ 41238927 (+)
trnap-ugg-13 NA coding downstream 284095 41239791 ~ 41239862 (+)
G1292306 NA non-coding upstream 21490 40851335 ~ 40928127 (+)
G1292330 LOC106612419 non-coding upstream 58236 40889270 ~ 40891381 (+)
G1292217 NA non-coding upstream 247026 40702284 ~ 40702591 (+)
G1292216 NA non-coding upstream 248024 40701308 ~ 40701593 (+)
G1292214 NA non-coding upstream 251166 40698239 ~ 40698451 (+)
G1292380 NA non-coding downstream 8090 40963786 ~ 40967065 (+)
G1292609 NA non-coding downstream 31725 40987421 ~ 40987623 (+)
G1292613 NA non-coding downstream 36991 40992687 ~ 40992934 (+)
G1292620 NA non-coding downstream 41542 40997238 ~ 40997788 (+)
G1292629 NA non-coding downstream 49613 41005309 ~ 41005619 (+)
G1291464 NA other upstream 881710 40067558 ~ 40067907 (+)
G1290614 NA other upstream 1822608 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 1911958 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2349376 38594880 ~ 38600241 (+)
G1293072 NA other downstream 627677 41583216 ~ 41589030 (+)
G1293295 NA other downstream 953338 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1809157 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2641228 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2960482 43916178 ~ 43916479 (+)

Expression


Co-expression Network