G1292774


Basic Information

Item Value
gene id G1292774
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41175464 ~ 41175720 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1475269
ATTCTAGCAGCAAGCTACACGGAAAATGGAACAGATGGATAGGGGAAACAGCTTGAGTCACACAAAACGGACATCTAATGAACTGCATCATTGCGTTGCTGTTTCTAAAAGGACGTATTTGGGTGTTATTGGAACATTTGTTCATGTTTTTCAGAGCCCCTAGTACTGCACAGCGAGGGTGAGGAAGTGAATCGCTGGttggggtaagtttctcaaaaacaagtgaaatcTCAAAAAGTGCCTGGGCCCTTCTATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1475269 True 257 lncRNA 0.43 1 41175464 41175720

Neighbor

gene id symbol gene type direction distance location
LOC110490065 LOC106580667 coding upstream 18607 41093530 ~ 41156857 (+)
tfdp2 LOC105026801 coding upstream 86926 41030376 ~ 41088538 (+)
LOC110490048 il-1racp coding upstream 1042864 40089464 ~ 40132600 (+)
LOC110490053 fgf12 coding upstream 1122388 39936886 ~ 40053076 (+)
LOC110490050 LOC106612350 coding upstream 1246239 39845713 ~ 39929225 (+)
trnap-ugg-11 NA coding downstream 61266 41236986 ~ 41237057 (+)
trnap-ugg-12 NA coding downstream 63136 41238856 ~ 41238927 (+)
trnap-ugg-13 NA coding downstream 64071 41239791 ~ 41239862 (+)
trnap-ugg-14 NA coding downstream 65006 41240726 ~ 41240797 (+)
trnap-ugg-15 NA coding downstream 66876 41242596 ~ 41242667 (+)
G1292772 NA non-coding upstream 1114 41172009 ~ 41174350 (+)
G1292773 NA non-coding upstream 4945 41170169 ~ 41170519 (+)
G1292771 NA non-coding upstream 7109 41168127 ~ 41168355 (+)
G1292767 NA non-coding upstream 12343 41162694 ~ 41163121 (+)
G1292683 NA non-coding upstream 123021 41046102 ~ 41052443 (+)
G1292775 LOC106612405 non-coding downstream 486 41176206 ~ 41177063 (+)
G1292792 NA non-coding downstream 21375 41197095 ~ 41197777 (+)
G1292922 NA non-coding downstream 49817 41225537 ~ 41225772 (+)
G1292932 NA non-coding downstream 58827 41234547 ~ 41235019 (+)
G1292939 NA non-coding downstream 83161 41258881 ~ 41385174 (+)
G1291464 NA other upstream 1107557 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2048455 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2137805 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2575223 38594880 ~ 38600241 (+)
G1293072 NA other downstream 407653 41583216 ~ 41589030 (+)
G1293295 NA other downstream 733314 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1589133 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2421204 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2740458 43916178 ~ 43916479 (+)

Expression


Co-expression Network