G1293019


Basic Information

Item Value
gene id G1293019
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41510187 ~ 41510710 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1475542
atccaattgattttgatgtctactttttcatttttttaatctacatttagctctttcttcatttgtttcttgctgttacagctaatgaagattgaatctgaaagactcagcagatgaattacagagtatttgaactgaaacctggtcaactgctttgaagatagctatgctcacaagtataccaccaacactcaagtgattcactgtggcctggcaccatcgacctgtcaatccaaatcctcaccgtcattgctggcgactgcaaaaaaACACCTTAGATAaagtggctcgttggtctaggggtatgattctagCTTCGGGTGCGAGAGATCCCatgttcaaatcccggatgaccCCATTTGTAGAGCTTTTAACAATCAGAGataggcggttcttgggcaactggttggagtgctgaacgaggtggatgagtgataaaggcaatggactgctaatccattgtgctctgcactcgtgggttcaacatcgcacaacatttattcatttcttccttggttaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1475542 True 524 lncRNA 0.42 1 41510187 41510710

Neighbor

gene id symbol gene type direction distance location
trnap-cgg-201 NA coding upstream 2404 41507712 ~ 41507783 (+)
trnap-cgg-200 NA coding upstream 3318 41506798 ~ 41506869 (+)
trnap-cgg-199 NA coding upstream 17954 41492162 ~ 41492233 (+)
trnap-cgg-198 NA coding upstream 19784 41490332 ~ 41490403 (+)
trnap-cgg-197 NA coding upstream 20699 41489417 ~ 41489488 (+)
trnap-cgg-202 NA coding downstream 5235 41515945 ~ 41516016 (+)
trnap-cgg-203 NA coding downstream 14252 41524962 ~ 41525033 (+)
trnap-cgg-204 NA coding downstream 16920 41527630 ~ 41527701 (+)
trnap-cgg-205 NA coding downstream 23060 41533280 ~ 41533841 (+)
trnap-cgg-206 NA coding downstream 24911 41535621 ~ 41535692 (+)
trnap-cgg-152 NA non-coding upstream 65404 41444226 ~ 41444783 (+)
trnap-cgg-127 NA non-coding upstream 90763 41419008 ~ 41419424 (+)
trnap-cgg-116 NA non-coding upstream 101098 41408749 ~ 41409089 (+)
trnap-cgg-115 NA non-coding upstream 102055 41407848 ~ 41408132 (+)
trnap-cgg-114 NA non-coding upstream 102669 41406973 ~ 41407518 (+)
G1293020 NA non-coding downstream 1365 41512075 ~ 41512941 (+)
G1293025 NA non-coding downstream 17760 41528470 ~ 41529058 (+)
G1293027 NA non-coding downstream 18457 41529167 ~ 41529827 (+)
G1293045 NA non-coding downstream 34188 41544898 ~ 41545622 (+)
LOC110490048 il-1racp other upstream 1379453 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1442280 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2383178 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2472528 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2909946 38594880 ~ 38600241 (+)
G1293072 NA other downstream 72663 41583216 ~ 41589030 (+)
G1293295 NA other downstream 398324 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1254143 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2086214 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2405468 43916178 ~ 43916479 (+)

Expression


Co-expression Network