G1293025


Basic Information

Item Value
gene id G1293025
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41528470 ~ 41529058 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1475548
ctcaagtgattcactgtggcctggcaccatcgacctgtcaatgcaaatcctcaccgtcattgctggcaaCTGCAAAAAAATGCCTTAGATAaagtggctcgttggtctaggggtatgattctcgcttcgggtgcgagaggtctcGGGATGAGTGCTGaatgaggtggatgagtgataaaggcaatggactgctaatccattgtgctctgcactcgtgggttcaacatcgcacaacatttattaatttcttccttggttaaaaaatctgtcattttaaccggtacatagattaccttcagacgagtcccgtgacccttgtggaggtcgtagagcaaaactgagaaggacattgtgtttgtgagagtctcccctttccatgtaatggtcaaacgattttgtaggtcaaaccggtcaggaagctacagccatttgtatgagaagacacatttccgggatatgtcatgttttgactaacattgctctcgctctgccgcatttcaccaaagatgcagaggagtgacatcagcggttatggaggtttgagaagcatccagtgcaaaataagtgacatttctagtttaaaacagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1475548 True 589 lncRNA 0.45 1 41528470 41529058

Neighbor

gene id symbol gene type direction distance location
trnap-cgg-204 NA coding upstream 769 41527630 ~ 41527701 (+)
trnap-cgg-203 NA coding upstream 3437 41524962 ~ 41525033 (+)
trnap-cgg-202 NA coding upstream 12454 41515945 ~ 41516016 (+)
trnap-cgg-201 NA coding upstream 20687 41507712 ~ 41507783 (+)
trnap-cgg-200 NA coding upstream 21601 41506798 ~ 41506869 (+)
trnap-cgg-205 NA coding downstream 4712 41533280 ~ 41533841 (+)
trnap-cgg-206 NA coding downstream 6563 41535621 ~ 41535692 (+)
trnap-cgg-207 NA coding downstream 8366 41537424 ~ 41537495 (+)
LOC110490071 clrn1 coding downstream 28590 41557648 ~ 41567851 (+)
LOC110490073 NA coding downstream 54277 41583335 ~ 41588120 (+)
G1293020 NA non-coding upstream 15529 41512075 ~ 41512941 (+)
G1293019 NA non-coding upstream 17760 41510187 ~ 41510710 (+)
trnap-cgg-152 NA non-coding upstream 83687 41444226 ~ 41444783 (+)
trnap-cgg-127 NA non-coding upstream 109046 41419008 ~ 41419424 (+)
trnap-cgg-116 NA non-coding upstream 119381 41408749 ~ 41409089 (+)
G1293027 NA non-coding downstream 109 41529167 ~ 41529827 (+)
G1293045 NA non-coding downstream 15840 41544898 ~ 41545622 (+)
G1293056 NA non-coding downstream 24476 41553534 ~ 41553948 (+)
G1293084 NA non-coding downstream 48771 41577829 ~ 41578216 (+)
LOC110490048 il-1racp other upstream 1397736 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1460563 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2401461 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2490811 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2928229 38594880 ~ 38600241 (+)
G1293072 NA other downstream 54315 41583216 ~ 41589030 (+)
G1293295 NA other downstream 379976 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1235795 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2067866 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2387120 43916178 ~ 43916479 (+)

Expression


Co-expression Network