Gene
RNA
| Item | Value |
|---|---|
| gene id | G1293072 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 41583216 ~ 41589030 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: stress-associated endoplasmic reticulum protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1475599 | False | 1200 | lncRNA | 0.40 | 3 | 41583216 | 41588144 |
| TU1475601 | False | 1133 | lncRNA | 0.41 | 3 | 41583283 | 41588144 |
| TU1475596 | False | 1043 | lncRNA | 0.41 | 3 | 41583373 | 41588144 |
| TU1475597 | False | 986 | lncRNA | 0.42 | 3 | 41583373 | 41588087 |
| TU1475598 | False | 1929 | lncRNA | 0.41 | 3 | 41583373 | 41589030 |
| TU1475600 | False | 814 | TUCP | 0.40 | 3 | 41583373 | 41588144 |
| TU1475602 | True | 757 | TUCP | 0.41 | 3 | 41583373 | 41588087 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490071 | clrn1 | coding | upstream | 15365 | 41557648 ~ 41567851 (+) |
| trnap-cgg-207 | NA | coding | upstream | 45721 | 41537424 ~ 41537495 (+) |
| trnap-cgg-206 | NA | coding | upstream | 47524 | 41535621 ~ 41535692 (+) |
| trnap-cgg-205 | NA | coding | upstream | 49375 | 41533280 ~ 41533841 (+) |
| trnap-cgg-204 | NA | coding | upstream | 55515 | 41527630 ~ 41527701 (+) |
| iqcg | iqcg | coding | downstream | 221213 | 41810243 ~ 41836130 (+) |
| LOC110490081 | LOC106580643 | coding | downstream | 336144 | 41925174 ~ 41951832 (+) |
| LOC118938919 | NA | coding | downstream | 430446 | 42019476 ~ 42023326 (+) |
| LOC110490085 | LOC106612498 | coding | downstream | 450924 | 42039954 ~ 42054610 (+) |
| LOC110490086 | LOC106612440 | coding | downstream | 565261 | 42154291 ~ 42255013 (+) |
| G1293084 | NA | non-coding | upstream | 5000 | 41577829 ~ 41578216 (+) |
| G1293056 | NA | non-coding | upstream | 29268 | 41553534 ~ 41553948 (+) |
| G1293045 | NA | non-coding | upstream | 37594 | 41544898 ~ 41545622 (+) |
| G1293027 | NA | non-coding | upstream | 53389 | 41529167 ~ 41529827 (+) |
| G1293089 | NA | non-coding | downstream | 2988 | 41592018 ~ 41592641 (+) |
| G1293079 | NA | non-coding | downstream | 21103 | 41610133 ~ 41610840 (+) |
| G1293074 | NA | non-coding | downstream | 36031 | 41625061 ~ 41626045 (+) |
| G1293077 | NA | non-coding | downstream | 37092 | 41626122 ~ 41626379 (+) |
| G1293169 | NA | non-coding | downstream | 144446 | 41733476 ~ 41735494 (+) |
| LOC110490048 | il-1racp | other | upstream | 1452482 | 40089464 ~ 40132600 (+) |
| G1291464 | NA | other | upstream | 1515309 | 40067558 ~ 40067907 (+) |
| G1290614 | NA | other | upstream | 2456207 | 39126272 ~ 39127009 (+) |
| G1290549 | LOC106590036 | other | upstream | 2545557 | 39037005 ~ 39061248 (+) |
| G1289710 | NA | other | upstream | 2982975 | 38594880 ~ 38600241 (+) |
| G1293295 | NA | other | downstream | 320004 | 41909034 ~ 41909611 (+) |
| G1294319 | NA | other | downstream | 1175823 | 42764853 ~ 42767937 (+) |
| G1295348 | LOC106602853 | other | downstream | 2007894 | 43596924 ~ 43597464 (+) |
| G1295730 | NA | other | downstream | 2327148 | 43916178 ~ 43916479 (+) |
| G1295845 | NA | other | downstream | 2440406 | 44029436 ~ 44029861 (+) |
| LOC110490072 | LOC106612410 | coding | downstream | 319 | 41588463 ~ 41625040 (+) |
