G1293089


Basic Information

Item Value
gene id G1293089
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41592018 ~ 41592641 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1475620
gtaacaatgatccaaggtctttcctcccctggttgcgcaatcgatatgctgataaaatttggggagtcttgttttcagattagccttgttaaaatgcACGTCACAACGCGGAGTGCCCGGATACaccccttagccgtggtatgttggccatataccacaaacccccgaggtgccttattgcaattataaactggttaccaatgtaattagggCAGTACAAAGAAATGTTTCCTCacacccgtggtatacggtctcatataccaatcagcattcagggctcgaaccacccagtttataattcattttatacaacgggtgggtacaatgctgattggttaaaaccgcattccagccggtgtctattccgcAAGTTACCACCATTTAAATCTATTACCTTAAAATACCTATTTTttttctgttccatctgactgcgcaatccactgtctcatcagcccagccaagcaatttataaacttgatctcctcTATAAAAAATTATCTAAATGTTagctcacatttcttttagactaacatttagttttcaacagtggagatttgtataaaccttgtcTGTCTTTcccaacatttgcaacattgtttcaatattcaaatttcaatctccagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1475620 True 624 lncRNA 0.40 1 41592018 41592641

Neighbor

gene id symbol gene type direction distance location
LOC110490073 NA coding upstream 3898 41583335 ~ 41588120 (+)
LOC110490071 clrn1 coding upstream 24167 41557648 ~ 41567851 (+)
trnap-cgg-207 NA coding upstream 54523 41537424 ~ 41537495 (+)
trnap-cgg-206 NA coding upstream 56326 41535621 ~ 41535692 (+)
trnap-cgg-205 NA coding upstream 58177 41533280 ~ 41533841 (+)
iqcg iqcg coding downstream 217602 41810243 ~ 41836130 (+)
LOC110490081 LOC106580643 coding downstream 332533 41925174 ~ 41951832 (+)
LOC118938919 NA coding downstream 426835 42019476 ~ 42023326 (+)
LOC110490085 LOC106612498 coding downstream 447313 42039954 ~ 42054610 (+)
LOC110490086 LOC106612440 coding downstream 561650 42154291 ~ 42255013 (+)
G1293072 NA non-coding upstream 2988 41583216 ~ 41589030 (+)
G1293084 NA non-coding upstream 13802 41577829 ~ 41578216 (+)
G1293056 NA non-coding upstream 38070 41553534 ~ 41553948 (+)
G1293045 NA non-coding upstream 46396 41544898 ~ 41545622 (+)
G1293079 NA non-coding downstream 17492 41610133 ~ 41610840 (+)
G1293074 NA non-coding downstream 32420 41625061 ~ 41626045 (+)
G1293077 NA non-coding downstream 33481 41626122 ~ 41626379 (+)
G1293169 NA non-coding downstream 140835 41733476 ~ 41735494 (+)
G1293174 NA non-coding downstream 147705 41740346 ~ 41749693 (+)
LOC110490048 il-1racp other upstream 1461284 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1524111 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2465009 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2554359 39037005 ~ 39061248 (+)
G1293295 NA other downstream 316393 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1172212 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2004283 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2323537 43916178 ~ 43916479 (+)
G1295845 NA other downstream 2436795 44029436 ~ 44029861 (+)

Expression


Co-expression Network