G1293261


Basic Information

Item Value
gene id G1293261
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41862216 ~ 41866725 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1475819
CCATGAAGAGGGCCGAGTCGTCCGTGTGGGTAGAACGCCTGGAGGGATACGTGTTCTCGTTCTCTGTGGGACTCAGCTTGGTAGGGCTTTGAGATGCTTTGTGCTTGACGTAGGTCATGACGGCGTCCCGCTGCACTGAGCGTGacttctgcctctcctcctcgtaCCGCAGGGCGGCCAACTGGGCCATCCTCCGCACGCGCTCCACGCCCCCACCCGGTGCCCCGCTCGGACCCGCACCAACCCCAGCCCCTGACCCTCTCtgaacacagggagagagaggaagagggaggaaacAAAACAAAGAGAGGAGTGAAAGGAAGGAAGATAGCAGAGGGAAACAGAAAGACGGAGAGGAGGCGGCatgaggaagaaaggagaggagttGAAAAG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1475819 True 393 lncRNA 0.60 3 41862216 41866725

Neighbor

gene id symbol gene type direction distance location
iqcg iqcg coding upstream 26086 41810243 ~ 41836130 (+)
LOC110490072 LOC106612410 coding upstream 237176 41588463 ~ 41625040 (+)
LOC110490073 NA coding upstream 274096 41583335 ~ 41588120 (+)
LOC110490071 clrn1 coding upstream 294365 41557648 ~ 41567851 (+)
trnap-cgg-207 NA coding upstream 324721 41537424 ~ 41537495 (+)
LOC110490081 LOC106580643 coding downstream 58449 41925174 ~ 41951832 (+)
LOC118938919 NA coding downstream 152751 42019476 ~ 42023326 (+)
LOC110490085 LOC106612498 coding downstream 173229 42039954 ~ 42054610 (+)
LOC110490086 LOC106612440 coding downstream 287566 42154291 ~ 42255013 (+)
trnaa-ugc-68 NA coding downstream 455321 42322046 ~ 42322117 (+)
G1293224 LOC106612432 non-coding upstream 52044 41805689 ~ 41810172 (+)
G1293174 NA non-coding upstream 112523 41740346 ~ 41749693 (+)
G1293169 NA non-coding upstream 126722 41733476 ~ 41735494 (+)
G1293077 NA non-coding upstream 235837 41626122 ~ 41626379 (+)
G1293074 NA non-coding upstream 236171 41625061 ~ 41626045 (+)
G1293315 NA non-coding downstream 80589 41947314 ~ 41948368 (+)
G1293597 NA non-coding downstream 136653 42003378 ~ 42003587 (+)
G1293603 NA non-coding downstream 142806 42009531 ~ 42050808 (+)
G1293626 LOC106612439 non-coding downstream 174388 42041113 ~ 42042826 (+)
G1293637 NA non-coding downstream 202935 42069660 ~ 42069949 (+)
G1293072 NA other upstream 274072 41583216 ~ 41589030 (+)
LOC110490048 il-1racp other upstream 1731482 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1794309 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2735207 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2824557 39037005 ~ 39061248 (+)
G1293295 NA other downstream 42309 41909034 ~ 41909611 (+)
G1294319 NA other downstream 898128 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 1730199 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2049453 43916178 ~ 43916479 (+)
G1295845 NA other downstream 2162711 44029436 ~ 44029861 (+)

Expression


Co-expression Network