G1293597


Basic Information

Item Value
gene id G1293597
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 42003378 ~ 42003587 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1476180
tggtattacagattcagtcagggacaggttgaaaatgtcagtgaagacacttgccagttggtcagcgcatgctctgagtacatgtcctgggcatccgtctggccctgcggccttgtgaatgttgacctgttaaaaggtcttactcacatcagctacggagaacgtgatcacacagttgtccggaacagctgatgctctgctctcatgcat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1476180 True 210 lncRNA 0.50 1 42003378 42003587

Neighbor

gene id symbol gene type direction distance location
LOC110490081 LOC106580643 coding upstream 51546 41925174 ~ 41951832 (+)
iqcg iqcg coding upstream 167248 41810243 ~ 41836130 (+)
LOC110490072 LOC106612410 coding upstream 378338 41588463 ~ 41625040 (+)
LOC110490073 NA coding upstream 415258 41583335 ~ 41588120 (+)
LOC110490071 clrn1 coding upstream 435527 41557648 ~ 41567851 (+)
LOC118938919 NA coding downstream 15889 42019476 ~ 42023326 (+)
LOC110490085 LOC106612498 coding downstream 36367 42039954 ~ 42054610 (+)
LOC110490086 LOC106612440 coding downstream 150704 42154291 ~ 42255013 (+)
trnaa-ugc-68 NA coding downstream 318459 42322046 ~ 42322117 (+)
trnat-ugu-37 NA coding downstream 319957 42323544 ~ 42323615 (+)
G1293315 NA non-coding upstream 55010 41947314 ~ 41948368 (+)
G1293261 NA non-coding upstream 136653 41862216 ~ 41866725 (+)
G1293224 LOC106612432 non-coding upstream 193206 41805689 ~ 41810172 (+)
G1293174 NA non-coding upstream 253685 41740346 ~ 41749693 (+)
G1293169 NA non-coding upstream 267884 41733476 ~ 41735494 (+)
G1293603 NA non-coding downstream 5944 42009531 ~ 42050808 (+)
G1293626 LOC106612439 non-coding downstream 37526 42041113 ~ 42042826 (+)
G1293637 NA non-coding downstream 66073 42069660 ~ 42069949 (+)
G1293769 NA non-coding downstream 197843 42201430 ~ 42201903 (+)
G1293798 NA non-coding downstream 253281 42256868 ~ 42257165 (+)
G1293295 NA other upstream 93767 41909034 ~ 41909611 (+)
G1293072 NA other upstream 415234 41583216 ~ 41589030 (+)
LOC110490048 il-1racp other upstream 1872644 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1935471 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2876369 39126272 ~ 39127009 (+)
G1294319 NA other downstream 761266 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 1593337 43596924 ~ 43597464 (+)
G1295730 NA other downstream 1912591 43916178 ~ 43916479 (+)
G1295845 NA other downstream 2025849 44029436 ~ 44029861 (+)
cblb cblb other downstream 2317916 44173352 ~ 44326246 (+)

Expression


Co-expression Network