G1293603


Basic Information

Item Value
gene id G1293603
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 42009531 ~ 42050808 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1476186
atatatttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgcactgtatatgccaaGCGTCTTAGAGTAGGATTGCTTATCTATGATAaggttccccctctctccatgtaatcttattcattaagCTCTAAAAGGCTAAACTTATCCTAGATCATCACTCCTGCCCTGAGAGGCTTGATGGATATAGGCTCTGAGCCGTGTCTGAAATGATACCCACACTAATTTTGTCCAAAGCCACACCCTGTTTCGAAGTTCTCAGTGTTTTCGAAGTACTCCCCAGCATGAGTATCTCTATGTAAGAGTATGATACTGTAGGCTTACAAAAGCTgtaaggggaaaaaaacaactaAAGTCGGCTCAAACTGAAgacggaaccccccccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1476186 True 420 lncRNA 0.44 2 42009531 42050808

Neighbor

gene id symbol gene type direction distance location
LOC110490081 LOC106580643 coding upstream 57699 41925174 ~ 41951832 (+)
iqcg iqcg coding upstream 173401 41810243 ~ 41836130 (+)
LOC110490072 LOC106612410 coding upstream 384491 41588463 ~ 41625040 (+)
LOC110490073 NA coding upstream 421411 41583335 ~ 41588120 (+)
LOC110490071 clrn1 coding upstream 441680 41557648 ~ 41567851 (+)
LOC110490086 LOC106612440 coding downstream 103483 42154291 ~ 42255013 (+)
trnaa-ugc-68 NA coding downstream 271238 42322046 ~ 42322117 (+)
trnat-ugu-37 NA coding downstream 272736 42323544 ~ 42323615 (+)
trnaa-ugc-69 NA coding downstream 273658 42324466 ~ 42324537 (+)
trnaa-ugc-70 NA coding downstream 274580 42325388 ~ 42325459 (+)
G1293597 NA non-coding upstream 5944 42003378 ~ 42003587 (+)
G1293315 NA non-coding upstream 61163 41947314 ~ 41948368 (+)
G1293261 NA non-coding upstream 142806 41862216 ~ 41866725 (+)
G1293224 LOC106612432 non-coding upstream 199359 41805689 ~ 41810172 (+)
G1293174 NA non-coding upstream 259838 41740346 ~ 41749693 (+)
G1293637 NA non-coding downstream 18852 42069660 ~ 42069949 (+)
G1293769 NA non-coding downstream 150622 42201430 ~ 42201903 (+)
G1293798 NA non-coding downstream 206060 42256868 ~ 42257165 (+)
G1293974 NA non-coding downstream 253489 42304297 ~ 42304553 (+)
G1293979 NA non-coding downstream 270783 42321591 ~ 42323337 (+)
G1293295 NA other upstream 99920 41909034 ~ 41909611 (+)
G1293072 NA other upstream 421387 41583216 ~ 41589030 (+)
LOC110490048 il-1racp other upstream 1878797 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1941624 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2882522 39126272 ~ 39127009 (+)
G1294319 NA other downstream 714045 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 1546116 43596924 ~ 43597464 (+)
G1295730 NA other downstream 1865370 43916178 ~ 43916479 (+)
G1295845 NA other downstream 1978628 44029436 ~ 44029861 (+)
cblb cblb other downstream 2270695 44173352 ~ 44326246 (+)

Expression


Co-expression Network