G1293798


Basic Information

Item Value
gene id G1293798
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 42256868 ~ 42257165 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1476393
ccCTTtacatcaggggtgtcaaactccttccatggagggcctagtgtctgcaggtgtttgttttttgtcctttcaattaagccctagacaaccagatgtggggagttccttactatttgatgaccttaattcatcaatcaagtgcAAAGGAGGAGCAGAAACCCgtagacactcggccctccatagAATGAGTTTAACACCTGTGCATTATACAATGTAAAGTCATGATTGAGTCATTCACCAAGAATAGAGCGTCCTCTTCGGTCTTCTGTTTCCCTATTTATCAGAGTAGTCTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1476393 True 298 lncRNA 0.44 1 42256868 42257165

Neighbor

gene id symbol gene type direction distance location
LOC110490086 LOC106612440 coding upstream 1855 42154291 ~ 42255013 (+)
LOC110490085 LOC106612498 coding upstream 202258 42039954 ~ 42054610 (+)
LOC118938919 NA coding upstream 233542 42019476 ~ 42023326 (+)
LOC110490081 LOC106580643 coding upstream 305036 41925174 ~ 41951832 (+)
iqcg iqcg coding upstream 420738 41810243 ~ 41836130 (+)
trnaa-ugc-68 NA coding downstream 64881 42322046 ~ 42322117 (+)
trnat-ugu-37 NA coding downstream 66379 42323544 ~ 42323615 (+)
trnaa-ugc-69 NA coding downstream 67301 42324466 ~ 42324537 (+)
trnaa-ugc-70 NA coding downstream 68223 42325388 ~ 42325459 (+)
trnaa-ugc-71 NA coding downstream 69146 42326311 ~ 42326382 (+)
G1293769 NA non-coding upstream 54965 42201430 ~ 42201903 (+)
G1293637 NA non-coding upstream 186919 42069660 ~ 42069949 (+)
G1293603 NA non-coding upstream 206060 42009531 ~ 42050808 (+)
G1293626 LOC106612439 non-coding upstream 214042 42041113 ~ 42042826 (+)
G1293597 NA non-coding upstream 253281 42003378 ~ 42003587 (+)
G1293974 NA non-coding downstream 47132 42304297 ~ 42304553 (+)
G1293979 NA non-coding downstream 64426 42321591 ~ 42323337 (+)
trnaa-ugc-118 NA non-coding downstream 114640 42371805 ~ 42383605 (+)
G1294052 NA non-coding downstream 192310 42449475 ~ 42449737 (+)
G1294276 NA non-coding downstream 300225 42557390 ~ 42568776 (+)
G1293295 NA other upstream 347257 41909034 ~ 41909611 (+)
G1293072 NA other upstream 668724 41583216 ~ 41589030 (+)
LOC110490048 il-1racp other upstream 2126134 40089464 ~ 40132600 (+)
G1291464 NA other upstream 2188961 40067558 ~ 40067907 (+)
G1290614 NA other upstream 3129859 39126272 ~ 39127009 (+)
G1294319 NA other downstream 507688 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 1339759 43596924 ~ 43597464 (+)
G1295730 NA other downstream 1659013 43916178 ~ 43916479 (+)
G1295845 NA other downstream 1772271 44029436 ~ 44029861 (+)
cblb cblb other downstream 2064338 44173352 ~ 44326246 (+)

Expression


Co-expression Network