Gene
RNA
| Item | Value |
|---|---|
| gene id | G1294325 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 42683624 ~ 42684414 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106527413 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1476975 | True | 754 | lncRNA | 0.39 | 2 | 42683624 | 42684414 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ncbp3 | ncbp3 | coding | upstream | 59396 | 42605307 ~ 42624228 (+) |
| tpst1l | tpst1 | coding | upstream | 137650 | 42528504 ~ 42545974 (+) |
| LOC110490091 | crcp | coding | upstream | 169987 | 42509769 ~ 42513637 (+) |
| LOC110490089 | zpld1 | coding | upstream | 239585 | 42398093 ~ 42444039 (+) |
| trnaa-ugc-120 | NA | coding | upstream | 309500 | 42374053 ~ 42374124 (+) |
| alg8 | alg8 | coding | downstream | 12301 | 42696715 ~ 42725617 (+) |
| guca1d | LOC106602844 | coding | downstream | 53214 | 42737628 ~ 42759052 (+) |
| trnaa-cgc-2 | NA | coding | downstream | 197345 | 42881759 ~ 42881830 (+) |
| LOC118938889 | kif12 | coding | downstream | 449793 | 43134207 ~ 43156862 (+) |
| slc13a2 | LOC106602849 | coding | downstream | 546141 | 43230555 ~ 43300368 (+) |
| G1294336 | NA | non-coding | upstream | 38394 | 42645014 ~ 42645230 (+) |
| G1294276 | NA | non-coding | upstream | 114848 | 42557390 ~ 42568776 (+) |
| G1294052 | NA | non-coding | upstream | 233887 | 42449475 ~ 42449737 (+) |
| trnaa-ugc-118 | NA | non-coding | upstream | 300019 | 42371805 ~ 42383605 (+) |
| G1293979 | NA | non-coding | upstream | 360287 | 42321591 ~ 42323337 (+) |
| G1294362 | NA | non-coding | downstream | 49877 | 42734291 ~ 42734604 (+) |
| G1294322 | NA | non-coding | downstream | 85081 | 42769495 ~ 42770500 (+) |
| G1294476 | NA | non-coding | downstream | 263121 | 42947535 ~ 42950110 (+) |
| G1294564 | NA | non-coding | downstream | 403053 | 43087467 ~ 43087808 (+) |
| G1294576 | NA | non-coding | downstream | 413794 | 43098208 ~ 43098439 (+) |
| G1293295 | NA | other | upstream | 774013 | 41909034 ~ 41909611 (+) |
| G1293072 | NA | other | upstream | 1095480 | 41583216 ~ 41589030 (+) |
| LOC110490048 | il-1racp | other | upstream | 2552890 | 40089464 ~ 40132600 (+) |
| G1291464 | NA | other | upstream | 2615717 | 40067558 ~ 40067907 (+) |
| G1290614 | NA | other | upstream | 3556615 | 39126272 ~ 39127009 (+) |
| G1294319 | NA | other | downstream | 80439 | 42764853 ~ 42767937 (+) |
| G1295348 | LOC106602853 | other | downstream | 912510 | 43596924 ~ 43597464 (+) |
| G1295730 | NA | other | downstream | 1231764 | 43916178 ~ 43916479 (+) |
| G1295845 | NA | other | downstream | 1345022 | 44029436 ~ 44029861 (+) |
| cblb | cblb | other | downstream | 1637089 | 44173352 ~ 44326246 (+) |
