Gene
RNA
| Item | Value |
|---|---|
| gene id | G1294476 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 42947535 ~ 42950110 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1477134 | False | 327 | lncRNA | 0.44 | 2 | 42947535 | 42950110 |
| TU1477135 | True | 327 | lncRNA | 0.44 | 2 | 42947535 | 42950110 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnaa-cgc-2 | NA | coding | upstream | 65705 | 42881759 ~ 42881830 (+) |
| guca1d | LOC106602844 | coding | upstream | 188483 | 42737628 ~ 42759052 (+) |
| alg8 | alg8 | coding | upstream | 221918 | 42696715 ~ 42725617 (+) |
| ncbp3 | ncbp3 | coding | upstream | 323307 | 42605307 ~ 42624228 (+) |
| tpst1l | tpst1 | coding | upstream | 401561 | 42528504 ~ 42545974 (+) |
| LOC118938889 | kif12 | coding | downstream | 184097 | 43134207 ~ 43156862 (+) |
| slc13a2 | LOC106602849 | coding | downstream | 280445 | 43230555 ~ 43300368 (+) |
| trnas-gcu-9 | NA | coding | downstream | 384279 | 43334389 ~ 43334470 (+) |
| trnas-gcu-10 | NA | coding | downstream | 384831 | 43334941 ~ 43335022 (+) |
| trnas-gcu-11 | NA | coding | downstream | 391409 | 43341519 ~ 43341600 (+) |
| G1294322 | NA | non-coding | upstream | 177035 | 42769495 ~ 42770500 (+) |
| G1294362 | NA | non-coding | upstream | 212931 | 42734291 ~ 42734604 (+) |
| G1294325 | NA | non-coding | upstream | 263121 | 42683624 ~ 42684414 (+) |
| G1294336 | NA | non-coding | upstream | 302305 | 42645014 ~ 42645230 (+) |
| G1294276 | NA | non-coding | upstream | 378759 | 42557390 ~ 42568776 (+) |
| G1294564 | NA | non-coding | downstream | 137357 | 43087467 ~ 43087808 (+) |
| G1294576 | NA | non-coding | downstream | 148098 | 43098208 ~ 43098439 (+) |
| G1294570 | NA | non-coding | downstream | 160231 | 43110341 ~ 43113311 (+) |
| G1294953 | NA | non-coding | downstream | 199942 | 43150052 ~ 43150374 (+) |
| G1294955 | vtn1 | non-coding | downstream | 219754 | 43169864 ~ 43171387 (+) |
| G1294319 | NA | other | upstream | 179598 | 42764853 ~ 42767937 (+) |
| G1293295 | NA | other | upstream | 1037924 | 41909034 ~ 41909611 (+) |
| G1293072 | NA | other | upstream | 1359391 | 41583216 ~ 41589030 (+) |
| LOC110490048 | il-1racp | other | upstream | 2816801 | 40089464 ~ 40132600 (+) |
| G1291464 | NA | other | upstream | 2879628 | 40067558 ~ 40067907 (+) |
| G1295348 | LOC106602853 | other | downstream | 646814 | 43596924 ~ 43597464 (+) |
| G1295730 | NA | other | downstream | 966068 | 43916178 ~ 43916479 (+) |
| G1295845 | NA | other | downstream | 1079326 | 44029436 ~ 44029861 (+) |
| cblb | cblb | other | downstream | 1371393 | 44173352 ~ 44326246 (+) |
| G1296266 | LOC106602826 | other | downstream | 1597069 | 44547179 ~ 44581048 (+) |
