G1294564


Basic Information

Item Value
gene id G1294564
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 43087467 ~ 43087808 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1477224
gtctatgagggtgcccatgtatacggatttagggttgtacctggtgggttccttgatgatttgactgagtcaatcaggccttcatggtcgaattgctgcaaagaaaccactactaaaggacactaatcaGAAGgaaatacttgcttgggccaagaaacacgagcaatggacattagaccggtggaaatctgtcttttggtctaatgagtccaaatttgagatttttggttccaaccgccatgtctttgtgagatgcagagtaggtgagcggatgatctctgcatgtttggttcccaccgtgaagcatggtggaggtgtGGTAGTGTGGAGGtgtttttctgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1477224 True 342 lncRNA 0.46 1 43087467 43087808

Neighbor

gene id symbol gene type direction distance location
trnaa-cgc-2 NA coding upstream 205637 42881759 ~ 42881830 (+)
guca1d LOC106602844 coding upstream 328415 42737628 ~ 42759052 (+)
alg8 alg8 coding upstream 361850 42696715 ~ 42725617 (+)
ncbp3 ncbp3 coding upstream 463239 42605307 ~ 42624228 (+)
tpst1l tpst1 coding upstream 541493 42528504 ~ 42545974 (+)
LOC118938889 kif12 coding downstream 46399 43134207 ~ 43156862 (+)
slc13a2 LOC106602849 coding downstream 142747 43230555 ~ 43300368 (+)
trnas-gcu-9 NA coding downstream 246581 43334389 ~ 43334470 (+)
trnas-gcu-10 NA coding downstream 247133 43334941 ~ 43335022 (+)
trnas-gcu-11 NA coding downstream 253711 43341519 ~ 43341600 (+)
G1294476 NA non-coding upstream 137357 42947535 ~ 42950110 (+)
G1294322 NA non-coding upstream 316967 42769495 ~ 42770500 (+)
G1294362 NA non-coding upstream 352863 42734291 ~ 42734604 (+)
G1294325 NA non-coding upstream 403053 42683624 ~ 42684414 (+)
G1294336 NA non-coding upstream 442237 42645014 ~ 42645230 (+)
G1294576 NA non-coding downstream 10400 43098208 ~ 43098439 (+)
G1294570 NA non-coding downstream 22533 43110341 ~ 43113311 (+)
G1294953 NA non-coding downstream 62244 43150052 ~ 43150374 (+)
G1294955 vtn1 non-coding downstream 82056 43169864 ~ 43171387 (+)
G1294992 NA non-coding downstream 138011 43225819 ~ 43232807 (+)
G1294319 NA other upstream 319530 42764853 ~ 42767937 (+)
G1293295 NA other upstream 1177856 41909034 ~ 41909611 (+)
G1293072 NA other upstream 1499323 41583216 ~ 41589030 (+)
LOC110490048 il-1racp other upstream 2956733 40089464 ~ 40132600 (+)
G1291464 NA other upstream 3019560 40067558 ~ 40067907 (+)
G1295348 LOC106602853 other downstream 509116 43596924 ~ 43597464 (+)
G1295730 NA other downstream 828370 43916178 ~ 43916479 (+)
G1295845 NA other downstream 941628 44029436 ~ 44029861 (+)
cblb cblb other downstream 1233695 44173352 ~ 44326246 (+)
G1296266 LOC106602826 other downstream 1459371 44547179 ~ 44581048 (+)

Expression


Co-expression Network