G1294570


Basic Information

Item Value
gene id G1294570
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 43110341 ~ 43113311 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1477230
GCACGTTGACTCATCACTATCCCCTCCTATAGCGATGGTGCTGTCCTCTGTCATGGCCATGATGCGTTTGAAGTGGCGCTGGTTGATGATGCGTCCGTAGTCGGGGCAGGTCTTGGGGTCCTCTGTGTAGAAGGCTTTGATGGACTTCTTGATCTCCTCCAGCACGCGGCCCTGGATGCTGGGCTCACACAGGATGTAGTCTGGCGCGATACACGTCTGCCCACAGTTAGAATACTTCCCCCATGT

Function

NR:

description
PREDICTED: fatty aldehyde dehydrogenase-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1477230 True 246 lncRNA 0.56 2 43110341 43113311

Neighbor

gene id symbol gene type direction distance location
trnaa-cgc-2 NA coding upstream 228511 42881759 ~ 42881830 (+)
guca1d LOC106602844 coding upstream 351289 42737628 ~ 42759052 (+)
alg8 alg8 coding upstream 384724 42696715 ~ 42725617 (+)
ncbp3 ncbp3 coding upstream 486113 42605307 ~ 42624228 (+)
tpst1l tpst1 coding upstream 564367 42528504 ~ 42545974 (+)
LOC118938889 kif12 coding downstream 20896 43134207 ~ 43156862 (+)
slc13a2 LOC106602849 coding downstream 117244 43230555 ~ 43300368 (+)
trnas-gcu-9 NA coding downstream 221078 43334389 ~ 43334470 (+)
trnas-gcu-10 NA coding downstream 221630 43334941 ~ 43335022 (+)
trnas-gcu-11 NA coding downstream 228208 43341519 ~ 43341600 (+)
G1294576 NA non-coding upstream 11902 43098208 ~ 43098439 (+)
G1294564 NA non-coding upstream 22533 43087467 ~ 43087808 (+)
G1294476 NA non-coding upstream 160231 42947535 ~ 42950110 (+)
G1294322 NA non-coding upstream 339841 42769495 ~ 42770500 (+)
G1294362 NA non-coding upstream 375737 42734291 ~ 42734604 (+)
G1294953 NA non-coding downstream 36741 43150052 ~ 43150374 (+)
G1294955 vtn1 non-coding downstream 56553 43169864 ~ 43171387 (+)
G1294992 NA non-coding downstream 112508 43225819 ~ 43232807 (+)
G1295023 NA non-coding downstream 162298 43275609 ~ 43277639 (+)
G1295025 NA non-coding downstream 166624 43279935 ~ 43319383 (+)
G1294319 NA other upstream 342404 42764853 ~ 42767937 (+)
G1293295 NA other upstream 1200730 41909034 ~ 41909611 (+)
G1293072 NA other upstream 1522197 41583216 ~ 41589030 (+)
LOC110490048 il-1racp other upstream 2979607 40089464 ~ 40132600 (+)
G1291464 NA other upstream 3042434 40067558 ~ 40067907 (+)
G1295348 LOC106602853 other downstream 483613 43596924 ~ 43597464 (+)
G1295730 NA other downstream 802867 43916178 ~ 43916479 (+)
G1295845 NA other downstream 916125 44029436 ~ 44029861 (+)
cblb cblb other downstream 1208192 44173352 ~ 44326246 (+)
G1296266 LOC106602826 other downstream 1433868 44547179 ~ 44581048 (+)

Expression


Co-expression Network