G1295208



Basic Information


Item Value
gene id G1295208
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 43426842 ~ 43457776 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1477935
gagtggtgaaggcgatgaactgcatgtgtggattataacaccaacctcttcacacaacatttgttatttcctctcttacatggccccacatgaaaatataatccctgcgcaatcctagagcgactaataagattcaggtattgaagaataacttcaacaagggcaacctcaatagtgggatttgaaccgacacctcaacacacttaatcaagccctggagaccactcggcctgacaaaacatttgttaaatgtctcgatgggatctaCACATgaccttgccattgctctgcataactttcattgatttcaatctag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1477935 True 316 lncRNA 0.42 3 43426842 43457776

Neighbor


gene id symbol gene type direction distance location
trnas-gcu-75 NA coding upstream 109 43426652 ~ 43426733 (+)
trnas-gcu-74 NA coding upstream 1184 43425577 ~ 43425658 (+)
trnas-gcu-73 NA coding upstream 1746 43425015 ~ 43425096 (+)
trnas-gcu-72 NA coding upstream 2614 43424147 ~ 43424228 (+)
trnas-gcu-71 NA coding upstream 3733 43423028 ~ 43423109 (+)
trnas-gcu-112 NA coding downstream 58 43457834 ~ 43457915 (+)
trnas-gcu-113 NA coding downstream 2086 43459862 ~ 43459943 (+)
trnas-gcu-114 NA coding downstream 3762 43461538 ~ 43461619 (+)
trnas-gcu-115 NA coding downstream 4324 43462100 ~ 43462181 (+)
trnas-gcu-116 NA coding downstream 5441 43463217 ~ 43463298 (+)
G1295185 NA non-coding upstream 73212 43347076 ~ 43353630 (+)
G1295178 NA non-coding upstream 95465 43331079 ~ 43331377 (+)
G1295176 NA non-coding upstream 97895 43328626 ~ 43328947 (+)
G1295025 NA non-coding upstream 107459 43279935 ~ 43319383 (+)
G1295023 NA non-coding upstream 149203 43275609 ~ 43277639 (+)
trnas-gcu-157 NA non-coding downstream 51325 43509101 ~ 43510533 (+)
G1295289 NA non-coding downstream 66042 43523818 ~ 43524059 (+)
G1295306 NA non-coding downstream 83497 43541273 ~ 43541595 (+)
G1295316 NA non-coding downstream 91016 43548792 ~ 43549416 (+)
G1295346 NA non-coding downstream 126508 43584284 ~ 43584574 (+)
G1294319 NA other upstream 658905 42764853 ~ 42767937 (+)
G1293295 NA other upstream 1517231 41909034 ~ 41909611 (+)
G1293072 NA other upstream 1838698 41583216 ~ 41589030 (+)
LOC110490048 il-1racp other upstream 3296108 40089464 ~ 40132600 (+)
G1291464 NA other upstream 3358935 40067558 ~ 40067907 (+)
G1295348 LOC106602853 other downstream 139148 43596924 ~ 43597464 (+)
G1295730 NA other downstream 458402 43916178 ~ 43916479 (+)
G1295845 NA other downstream 571660 44029436 ~ 44029861 (+)
cblb cblb other downstream 863727 44173352 ~ 44326246 (+)
G1296266 LOC106602826 other downstream 1089403 44547179 ~ 44581048 (+)

Expression



Co-expression Network