Gene
RNA
| Item | Value |
|---|---|
| gene id | G1295346 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 43584284 ~ 43584574 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1478088 | True | 291 | lncRNA | 0.36 | 1 | 43584284 | 43584574 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490104 | LOC106602850 | coding | upstream | 50050 | 43530002 ~ 43534234 (+) |
| trnas-gcu-162 | NA | coding | upstream | 67264 | 43516939 ~ 43517020 (+) |
| trnas-gcu-161 | NA | coding | upstream | 69495 | 43514708 ~ 43514789 (+) |
| trnas-gcu-160 | NA | coding | upstream | 70952 | 43513251 ~ 43513332 (+) |
| trnas-gcu-159 | NA | coding | upstream | 72070 | 43512133 ~ 43512214 (+) |
| LOC110490107 | lis1b | coding | downstream | 56807 | 43641381 ~ 43692014 (+) |
| LOC110490730 | NA | coding | downstream | 111638 | 43696212 ~ 43697965 (+) |
| mntb | LOC106602836 | coding | downstream | 113881 | 43698455 ~ 43718346 (+) |
| mrps17 | mrps17 | coding | downstream | 413439 | 43998013 ~ 43999931 (+) |
| nipsnap2 | nips2 | coding | downstream | 420839 | 44005413 ~ 44024583 (+) |
| G1295316 | NA | non-coding | upstream | 34868 | 43548792 ~ 43549416 (+) |
| G1295306 | NA | non-coding | upstream | 42689 | 43541273 ~ 43541595 (+) |
| G1295289 | NA | non-coding | upstream | 60225 | 43523818 ~ 43524059 (+) |
| trnas-gcu-157 | NA | non-coding | upstream | 73830 | 43509101 ~ 43510533 (+) |
| G1295208 | NA | non-coding | upstream | 126508 | 43426842 ~ 43457776 (+) |
| G1295329 | NA | non-coding | downstream | 2351 | 43586925 ~ 43588112 (+) |
| G1295331 | LOC106602853 | non-coding | downstream | 10525 | 43595099 ~ 43595445 (+) |
| G1295349 | LOC106602853 | non-coding | downstream | 13003 | 43597577 ~ 43598229 (+) |
| G1295365 | LOC106584613 | non-coding | downstream | 36341 | 43620915 ~ 43621192 (+) |
| G1295371 | NA | non-coding | downstream | 47483 | 43632057 ~ 43632307 (+) |
| G1294319 | NA | other | upstream | 816347 | 42764853 ~ 42767937 (+) |
| G1293295 | NA | other | upstream | 1674673 | 41909034 ~ 41909611 (+) |
| G1293072 | NA | other | upstream | 1996140 | 41583216 ~ 41589030 (+) |
| LOC110490048 | il-1racp | other | upstream | 3453550 | 40089464 ~ 40132600 (+) |
| G1291464 | NA | other | upstream | 3516377 | 40067558 ~ 40067907 (+) |
| G1295348 | LOC106602853 | other | downstream | 12350 | 43596924 ~ 43597464 (+) |
| G1295730 | NA | other | downstream | 331604 | 43916178 ~ 43916479 (+) |
| G1295845 | NA | other | downstream | 444862 | 44029436 ~ 44029861 (+) |
| cblb | cblb | other | downstream | 736929 | 44173352 ~ 44326246 (+) |
| G1296266 | LOC106602826 | other | downstream | 962605 | 44547179 ~ 44581048 (+) |
