G1295404


Basic Information

Item Value
gene id G1295404
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 43736267 ~ 43736786 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1478154
gactaagaatgccttgaagatcgacCGGTCGATTGTGACCGGTTGGTTACCACTGTTCTAATCATTCTACTTCTATGAGCCCAATCCTACCCGTCACATCATATTACCCACAACCCACTACAACGGGCTTAACGCTAGGCTCTCTCTAATACGCTGATCTCCGGTAAGAGGATGGGGGGGTTGGAGACTTAGTCTAGCACACACACTTGTTTACCTACTACAGTACATTGTAACCTACAACAATTCTACAAATATAGATGGAACTAAAGGAATATATCTTAAACTCTTCTCCGTATGTAGGGTTTTCAGCAATTACATTTGCCCACATTTGGCTCTGTGTAAACTACAATTTCGACACTATTTTAACGTTTAGAAACGTCAAATCAGCGCTTTCAATAAGGGTTTCCTAAACATATACTGATATGCCTCTTATCTTTCATTTAAGCGAGAAATAATATTTCAAATTAAAAAGAGAcacttactgtagcagttttGCACAGATCCATACACCGTGTGTGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1478154 True 520 lncRNA 0.40 1 43736267 43736786

Neighbor

gene id symbol gene type direction distance location
mntb LOC106602836 coding upstream 17921 43698455 ~ 43718346 (+)
LOC110490730 NA coding upstream 38449 43696212 ~ 43697965 (+)
LOC110490107 lis1b coding upstream 44253 43641381 ~ 43692014 (+)
LOC110490104 LOC106602850 coding upstream 202033 43530002 ~ 43534234 (+)
trnas-gcu-162 NA coding upstream 219247 43516939 ~ 43517020 (+)
mrps17 mrps17 coding downstream 261227 43998013 ~ 43999931 (+)
nipsnap2 nips2 coding downstream 268627 44005413 ~ 44024583 (+)
cblb cblb coding downstream 436566 44173352 ~ 44326246 (+)
LOC110490121 LOC106602827 coding downstream 849499 44586285 ~ 44603799 (+)
LOC110490732 LOC106602993 coding downstream 910007 44646793 ~ 44648830 (+)
G1295402 NA non-coding upstream 1310 43734611 ~ 43734957 (+)
G1295401 NA non-coding upstream 1904 43733642 ~ 43734363 (+)
G1295396 LOC106602834 non-coding upstream 5482 43730095 ~ 43730785 (+)
G1295391 NA non-coding upstream 23085 43711035 ~ 43713182 (+)
G1295405 NA non-coding downstream 665 43737451 ~ 43737759 (+)
G1295415 NA non-coding downstream 14329 43751115 ~ 43751625 (+)
G1295447 NA non-coding downstream 68437 43805223 ~ 43805857 (+)
G1295468 NA non-coding downstream 95374 43832160 ~ 43856264 (+)
G1295728 NA non-coding downstream 176959 43913745 ~ 43913986 (+)
G1295348 LOC106602853 other upstream 138803 43596924 ~ 43597464 (+)
G1294319 NA other upstream 968330 42764853 ~ 42767937 (+)
G1293295 NA other upstream 1826656 41909034 ~ 41909611 (+)
G1293072 NA other upstream 2148123 41583216 ~ 41589030 (+)
LOC110490048 il-1racp other upstream 3605533 40089464 ~ 40132600 (+)
G1295730 NA other downstream 179392 43916178 ~ 43916479 (+)
G1295845 NA other downstream 292650 44029436 ~ 44029861 (+)
G1296266 LOC106602826 other downstream 810393 44547179 ~ 44581048 (+)
G1296185 NA other downstream 912915 44649701 ~ 44652079 (+)

Expression


Co-expression Network