G1295405


Basic Information

Item Value
gene id G1295405
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 43737451 ~ 43737759 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1478155
CAGGTTTGAAGCTGCTACGTAACCTGACAGGCGACGACATGTGGTCCATGTTGCGGTGCAGTGCGCTGTCAGCTGGTCATCGGACGGCTAAAATCGCGTACCTTCGGTGTCTGTCAAAACAATCTCGCTCCGTCAATGACCGGATTTTGTTCCAACTTGGCCCTAAACCAGGGGTACGTTCAGTTTGCTTGAACGTTTGCTACGCTGCAGAACAGTTTGTACTTCGTACGTTTTCCCAAAACGTTCTTGAACAGACTTTGAGATGTGTGCGGGGGTGTGGCTTGCAGCAAAGAGTGACCTATTTAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1478155 True 309 lncRNA 0.50 1 43737451 43737759

Neighbor

gene id symbol gene type direction distance location
mntb LOC106602836 coding upstream 19105 43698455 ~ 43718346 (+)
LOC110490730 NA coding upstream 39633 43696212 ~ 43697965 (+)
LOC110490107 lis1b coding upstream 45437 43641381 ~ 43692014 (+)
LOC110490104 LOC106602850 coding upstream 203217 43530002 ~ 43534234 (+)
trnas-gcu-162 NA coding upstream 220431 43516939 ~ 43517020 (+)
mrps17 mrps17 coding downstream 260254 43998013 ~ 43999931 (+)
nipsnap2 nips2 coding downstream 267654 44005413 ~ 44024583 (+)
cblb cblb coding downstream 435593 44173352 ~ 44326246 (+)
LOC110490121 LOC106602827 coding downstream 848526 44586285 ~ 44603799 (+)
LOC110490732 LOC106602993 coding downstream 909034 44646793 ~ 44648830 (+)
G1295404 NA non-coding upstream 665 43736267 ~ 43736786 (+)
G1295402 NA non-coding upstream 2494 43734611 ~ 43734957 (+)
G1295401 NA non-coding upstream 3088 43733642 ~ 43734363 (+)
G1295396 LOC106602834 non-coding upstream 6666 43730095 ~ 43730785 (+)
G1295391 NA non-coding upstream 24269 43711035 ~ 43713182 (+)
G1295415 NA non-coding downstream 13356 43751115 ~ 43751625 (+)
G1295447 NA non-coding downstream 67464 43805223 ~ 43805857 (+)
G1295468 NA non-coding downstream 94401 43832160 ~ 43856264 (+)
G1295728 NA non-coding downstream 175986 43913745 ~ 43913986 (+)
G1295736 NA non-coding downstream 182474 43920233 ~ 43920460 (+)
G1295348 LOC106602853 other upstream 139987 43596924 ~ 43597464 (+)
G1294319 NA other upstream 969514 42764853 ~ 42767937 (+)
G1293295 NA other upstream 1827840 41909034 ~ 41909611 (+)
G1293072 NA other upstream 2149307 41583216 ~ 41589030 (+)
LOC110490048 il-1racp other upstream 3606717 40089464 ~ 40132600 (+)
G1295730 NA other downstream 178419 43916178 ~ 43916479 (+)
G1295845 NA other downstream 291677 44029436 ~ 44029861 (+)
G1296266 LOC106602826 other downstream 809420 44547179 ~ 44581048 (+)
G1296185 NA other downstream 911942 44649701 ~ 44652079 (+)

Expression


Co-expression Network