G1295468


Basic Information

Item Value
gene id G1295468
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 43832160 ~ 43856264 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1478218
TACCTGGTCCAAAGAGAGCTCCACCCGAGGAGGAGGAGCCATAACCTGATTTGTTTGGCTTCACTGCACCCTGTCCGGCTCCACCTGGTCCATAACCACCAGGCCCAGTCCCATAGCCATCTGGTACGGCCCCAACTCCTCCCTGGCCAAGTCCAGTCCCAGCACCCCCTCCTGGTCCATAACCACCAACAGTTCCACCACCAGGTCCAAATCCAGCTCCAGGACCATAACCACCGGggacacctccaccaccaagcCCAGATCCAGGCACTCCACCCTGGCCTACTCCAgtccctgctccccctcctggTACTCCTCCCAGGCTGGCTGCCTGTCCTCCTCCTGGGGTCCCAAGGACACCACTTAGCATACCTGTCAGTGGAGACATTGATTTACCTCTCTATTAAAGTATTATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1478218 True 417 lncRNA 0.58 2 43832160 43856264

Neighbor

gene id symbol gene type direction distance location
mntb LOC106602836 coding upstream 113814 43698455 ~ 43718346 (+)
LOC110490730 NA coding upstream 134342 43696212 ~ 43697965 (+)
LOC110490107 lis1b coding upstream 140146 43641381 ~ 43692014 (+)
LOC110490104 LOC106602850 coding upstream 297926 43530002 ~ 43534234 (+)
trnas-gcu-162 NA coding upstream 315140 43516939 ~ 43517020 (+)
mrps17 mrps17 coding downstream 141749 43998013 ~ 43999931 (+)
nipsnap2 nips2 coding downstream 149149 44005413 ~ 44024583 (+)
cblb cblb coding downstream 317088 44173352 ~ 44326246 (+)
LOC110490121 LOC106602827 coding downstream 730021 44586285 ~ 44603799 (+)
LOC110490732 LOC106602993 coding downstream 790529 44646793 ~ 44648830 (+)
G1295447 NA non-coding upstream 26303 43805223 ~ 43805857 (+)
G1295415 NA non-coding upstream 80535 43751115 ~ 43751625 (+)
G1295405 NA non-coding upstream 94401 43737451 ~ 43737759 (+)
G1295404 NA non-coding upstream 95374 43736267 ~ 43736786 (+)
G1295402 NA non-coding upstream 97203 43734611 ~ 43734957 (+)
G1295728 NA non-coding downstream 57481 43913745 ~ 43913986 (+)
G1295736 NA non-coding downstream 63969 43920233 ~ 43920460 (+)
G1295775 NA non-coding downstream 92920 43949184 ~ 43949400 (+)
G1295787 NA non-coding downstream 103135 43959399 ~ 43959606 (+)
G1295788 NA non-coding downstream 104174 43960438 ~ 43960897 (+)
G1295348 LOC106602853 other upstream 234696 43596924 ~ 43597464 (+)
G1294319 NA other upstream 1064223 42764853 ~ 42767937 (+)
G1293295 NA other upstream 1922549 41909034 ~ 41909611 (+)
G1293072 NA other upstream 2244016 41583216 ~ 41589030 (+)
LOC110490048 il-1racp other upstream 3701426 40089464 ~ 40132600 (+)
G1295730 NA other downstream 59914 43916178 ~ 43916479 (+)
G1295845 NA other downstream 173172 44029436 ~ 44029861 (+)
G1296266 LOC106602826 other downstream 690915 44547179 ~ 44581048 (+)
G1296185 NA other downstream 793437 44649701 ~ 44652079 (+)

Expression


Co-expression Network