G1295728


Basic Information

Item Value
gene id G1295728
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 43913745 ~ 43913986 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1478514
aacgcatgtcaaaaatgttataaattgatttgcattttcatgagggaaataagtatttgaccccctctcaatcagaaagatttctggctcccacactcttaaagggagtgctcttaatctcagtttgttacctgtataaaagacacctgtccacagaagtaATCAATccgattccaaactctccaccatggccaagaccgaagagctctccaaggatgtcagggacaagattgtagacctac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1478514 True 242 lncRNA 0.41 1 43913745 43913986

Neighbor

gene id symbol gene type direction distance location
mntb LOC106602836 coding upstream 195399 43698455 ~ 43718346 (+)
LOC110490730 NA coding upstream 215927 43696212 ~ 43697965 (+)
LOC110490107 lis1b coding upstream 221731 43641381 ~ 43692014 (+)
LOC110490104 LOC106602850 coding upstream 379511 43530002 ~ 43534234 (+)
trnas-gcu-162 NA coding upstream 396725 43516939 ~ 43517020 (+)
mrps17 mrps17 coding downstream 84027 43998013 ~ 43999931 (+)
nipsnap2 nips2 coding downstream 91427 44005413 ~ 44024583 (+)
cblb cblb coding downstream 259366 44173352 ~ 44326246 (+)
LOC110490121 LOC106602827 coding downstream 672299 44586285 ~ 44603799 (+)
LOC110490732 LOC106602993 coding downstream 732807 44646793 ~ 44648830 (+)
G1295468 NA non-coding upstream 57481 43832160 ~ 43856264 (+)
G1295447 NA non-coding upstream 107888 43805223 ~ 43805857 (+)
G1295415 NA non-coding upstream 162120 43751115 ~ 43751625 (+)
G1295405 NA non-coding upstream 175986 43737451 ~ 43737759 (+)
G1295404 NA non-coding upstream 176959 43736267 ~ 43736786 (+)
G1295736 NA non-coding downstream 6247 43920233 ~ 43920460 (+)
G1295775 NA non-coding downstream 35198 43949184 ~ 43949400 (+)
G1295787 NA non-coding downstream 45413 43959399 ~ 43959606 (+)
G1295788 NA non-coding downstream 46452 43960438 ~ 43960897 (+)
G1295789 NA non-coding downstream 47999 43961985 ~ 43962297 (+)
G1295348 LOC106602853 other upstream 316281 43596924 ~ 43597464 (+)
G1294319 NA other upstream 1145808 42764853 ~ 42767937 (+)
G1293295 NA other upstream 2004134 41909034 ~ 41909611 (+)
G1293072 NA other upstream 2325601 41583216 ~ 41589030 (+)
LOC110490048 il-1racp other upstream 3783011 40089464 ~ 40132600 (+)
G1295730 NA other downstream 2192 43916178 ~ 43916479 (+)
G1295845 NA other downstream 115450 44029436 ~ 44029861 (+)
G1296266 LOC106602826 other downstream 633193 44547179 ~ 44581048 (+)
G1296185 NA other downstream 735715 44649701 ~ 44652079 (+)

Expression


Co-expression Network