G1295787


Basic Information

Item Value
gene id G1295787
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 43959399 ~ 43959606 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1478573
tcactccggagctgccggagtctcctgcctgtccggcgctgccggggTCTCCCACCTGTCTGGCACTGCCGGAGTCGTCCTtcactccagcgctgccggaatctcctgtccattcgggacccgtggctaaggtccccagtccgaggtcggcggcgagggtcgccgctcttaagaggccacggaggcggttaAGTAGGCGgagaaagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1478573 True 208 lncRNA 0.67 1 43959399 43959606

Neighbor

gene id symbol gene type direction distance location
mntb LOC106602836 coding upstream 241053 43698455 ~ 43718346 (+)
LOC110490730 NA coding upstream 261581 43696212 ~ 43697965 (+)
LOC110490107 lis1b coding upstream 267385 43641381 ~ 43692014 (+)
LOC110490104 LOC106602850 coding upstream 425165 43530002 ~ 43534234 (+)
trnas-gcu-162 NA coding upstream 442379 43516939 ~ 43517020 (+)
mrps17 mrps17 coding downstream 38407 43998013 ~ 43999931 (+)
nipsnap2 nips2 coding downstream 45807 44005413 ~ 44024583 (+)
cblb cblb coding downstream 213746 44173352 ~ 44326246 (+)
LOC110490121 LOC106602827 coding downstream 626679 44586285 ~ 44603799 (+)
LOC110490732 LOC106602993 coding downstream 687187 44646793 ~ 44648830 (+)
G1295775 NA non-coding upstream 9999 43949184 ~ 43949400 (+)
G1295736 NA non-coding upstream 38939 43920233 ~ 43920460 (+)
G1295728 NA non-coding upstream 45413 43913745 ~ 43913986 (+)
G1295468 NA non-coding upstream 103135 43832160 ~ 43856264 (+)
G1295447 NA non-coding upstream 153542 43805223 ~ 43805857 (+)
G1295788 NA non-coding downstream 832 43960438 ~ 43960897 (+)
G1295789 NA non-coding downstream 2379 43961985 ~ 43962297 (+)
G1295843 NA non-coding downstream 67981 44027587 ~ 44027878 (+)
G1295849 NA non-coding downstream 77784 44037390 ~ 44037673 (+)
G1295872 NA non-coding downstream 111380 44070986 ~ 44123435 (+)
G1295730 NA other upstream 42920 43916178 ~ 43916479 (+)
G1295348 LOC106602853 other upstream 361935 43596924 ~ 43597464 (+)
G1294319 NA other upstream 1191462 42764853 ~ 42767937 (+)
G1293295 NA other upstream 2049788 41909034 ~ 41909611 (+)
G1293072 NA other upstream 2371255 41583216 ~ 41589030 (+)
G1295845 NA other downstream 69830 44029436 ~ 44029861 (+)
G1296266 LOC106602826 other downstream 587573 44547179 ~ 44581048 (+)
G1296185 NA other downstream 690095 44649701 ~ 44652079 (+)
G1298452 NA other downstream 2294733 46254339 ~ 46260437 (+)

Expression


Co-expression Network