G1295788


Basic Information

Item Value
gene id G1295788
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 43960438 ~ 43960897 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1478574
ACCTGCTACTCCGAGCAGACTTGATGGATTGTTTGGTCCCACTGATGGATTGTAAAAACGACAAATTGGGGTCATAAGTCATAAGTcacaaaccctaccacccctcccccaattggagtaaactaataaacaataacactagGCTTCTACAtactatacacattttacagacaatctattttacaatagttatattttgtttgtttttagtccttcctctatttctgatgtccattcagtttgatttctatttgtaactgtgctatttcacaacatttctgaacctatatacattttacagacacgtatgttttacattggttatcagTCCCACACTTTAACTCCTCCCATtgatctcttaacaccatccattttgtatttctatttgccatatatttttcaaccgtgctgtgatgcttcataaaagtactgaacctttctattctcatagcttctacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1478574 True 460 lncRNA 0.35 1 43960438 43960897

Neighbor

gene id symbol gene type direction distance location
mntb LOC106602836 coding upstream 242092 43698455 ~ 43718346 (+)
LOC110490730 NA coding upstream 262620 43696212 ~ 43697965 (+)
LOC110490107 lis1b coding upstream 268424 43641381 ~ 43692014 (+)
LOC110490104 LOC106602850 coding upstream 426204 43530002 ~ 43534234 (+)
trnas-gcu-162 NA coding upstream 443418 43516939 ~ 43517020 (+)
mrps17 mrps17 coding downstream 37116 43998013 ~ 43999931 (+)
nipsnap2 nips2 coding downstream 44516 44005413 ~ 44024583 (+)
cblb cblb coding downstream 212455 44173352 ~ 44326246 (+)
LOC110490121 LOC106602827 coding downstream 625388 44586285 ~ 44603799 (+)
LOC110490732 LOC106602993 coding downstream 685896 44646793 ~ 44648830 (+)
G1295787 NA non-coding upstream 832 43959399 ~ 43959606 (+)
G1295775 NA non-coding upstream 11038 43949184 ~ 43949400 (+)
G1295736 NA non-coding upstream 39978 43920233 ~ 43920460 (+)
G1295728 NA non-coding upstream 46452 43913745 ~ 43913986 (+)
G1295468 NA non-coding upstream 104174 43832160 ~ 43856264 (+)
G1295789 NA non-coding downstream 1088 43961985 ~ 43962297 (+)
G1295843 NA non-coding downstream 66690 44027587 ~ 44027878 (+)
G1295849 NA non-coding downstream 76493 44037390 ~ 44037673 (+)
G1295872 NA non-coding downstream 110089 44070986 ~ 44123435 (+)
G1295887 cfap54 non-coding downstream 133905 44094802 ~ 44095443 (+)
G1295730 NA other upstream 43959 43916178 ~ 43916479 (+)
G1295348 LOC106602853 other upstream 362974 43596924 ~ 43597464 (+)
G1294319 NA other upstream 1192501 42764853 ~ 42767937 (+)
G1293295 NA other upstream 2050827 41909034 ~ 41909611 (+)
G1293072 NA other upstream 2372294 41583216 ~ 41589030 (+)
G1295845 NA other downstream 68539 44029436 ~ 44029861 (+)
G1296266 LOC106602826 other downstream 586282 44547179 ~ 44581048 (+)
G1296185 NA other downstream 688804 44649701 ~ 44652079 (+)
G1298452 NA other downstream 2293442 46254339 ~ 46260437 (+)

Expression


Co-expression Network