G1295843


Basic Information

Item Value
gene id G1295843
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 44027587 ~ 44027878 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1478631
TAACAGAGCCTGTCATAGTGCTAGGGAGTAGTTTGATTAAGACTGTTTAACCGAGGCAGTGCACGCACTTCTCAATTGCCTAAATAGCTGCCAATCAGTTAACATGCGAGTTTGTCTAGCCTTGGCCCAGGCTTGATTTCTTATCTAGAGGTCTGAGAGTACAGGAGAGTACCATGGGTTATTTCAGTTTTTGACTCTGAGTCACTTGAAAGGGGCATGTTTATCAGCCAGAGGTAAAAATGGATGAGAAGAAATGTGCCAAAACAGGGTCTGGAATGCAAGCCAGTAGAAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC109204916

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1478631 True 292 lncRNA 0.44 1 44027587 44027878

Neighbor

gene id symbol gene type direction distance location
nipsnap2 nips2 coding upstream 3004 44005413 ~ 44024583 (+)
mrps17 mrps17 coding upstream 27656 43998013 ~ 43999931 (+)
mntb LOC106602836 coding upstream 309241 43698455 ~ 43718346 (+)
LOC110490730 NA coding upstream 329769 43696212 ~ 43697965 (+)
LOC110490107 lis1b coding upstream 335573 43641381 ~ 43692014 (+)
cblb cblb coding downstream 145474 44173352 ~ 44326246 (+)
LOC110490121 LOC106602827 coding downstream 558407 44586285 ~ 44603799 (+)
LOC110490732 LOC106602993 coding downstream 618915 44646793 ~ 44648830 (+)
cldn2 cldn7 coding downstream 691422 44719300 ~ 44721744 (+)
LOC110490127 LOC106602822 coding downstream 707882 44735760 ~ 44848514 (+)
G1295789 NA non-coding upstream 65290 43961985 ~ 43962297 (+)
G1295788 NA non-coding upstream 66690 43960438 ~ 43960897 (+)
G1295787 NA non-coding upstream 67981 43959399 ~ 43959606 (+)
G1295775 NA non-coding upstream 78187 43949184 ~ 43949400 (+)
G1295736 NA non-coding upstream 107127 43920233 ~ 43920460 (+)
G1295849 NA non-coding downstream 9512 44037390 ~ 44037673 (+)
G1295872 NA non-coding downstream 43108 44070986 ~ 44123435 (+)
G1295887 cfap54 non-coding downstream 66924 44094802 ~ 44095443 (+)
G1296030 NA non-coding downstream 124817 44152695 ~ 44153020 (+)
G1296051 NA non-coding downstream 140210 44168088 ~ 44168835 (+)
G1295730 NA other upstream 111108 43916178 ~ 43916479 (+)
G1295348 LOC106602853 other upstream 430123 43596924 ~ 43597464 (+)
G1294319 NA other upstream 1259650 42764853 ~ 42767937 (+)
G1293295 NA other upstream 2117976 41909034 ~ 41909611 (+)
G1293072 NA other upstream 2439443 41583216 ~ 41589030 (+)
G1295845 NA other downstream 1558 44029436 ~ 44029861 (+)
G1296266 LOC106602826 other downstream 519301 44547179 ~ 44581048 (+)
G1296185 NA other downstream 621823 44649701 ~ 44652079 (+)
G1298452 NA other downstream 2226461 46254339 ~ 46260437 (+)

Expression


Co-expression Network