Gene
RNA
| Item | Value |
|---|---|
| gene id | G1295845 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 44029436 ~ 44029861 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1478633 | True | 426 | TUCP | 0.45 | 1 | 44029436 | 44029861 |
44,028,000
44,028,400
44,028,800
44,029,200
44,029,600
44,030,000
44,030,400
44,030,400
44,030,800
44,031,200
44,031,600
44,032,000
44,032,400
44,032,800
NC_048579.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nipsnap2 | nips2 | coding | upstream | 4853 | 44005413 ~ 44024583 (+) |
| mrps17 | mrps17 | coding | upstream | 29505 | 43998013 ~ 43999931 (+) |
| mntb | LOC106602836 | coding | upstream | 311090 | 43698455 ~ 43718346 (+) |
| LOC110490730 | NA | coding | upstream | 331618 | 43696212 ~ 43697965 (+) |
| LOC110490107 | lis1b | coding | upstream | 337422 | 43641381 ~ 43692014 (+) |
| cblb | cblb | coding | downstream | 143491 | 44173352 ~ 44326246 (+) |
| LOC110490121 | LOC106602827 | coding | downstream | 556424 | 44586285 ~ 44603799 (+) |
| LOC110490732 | LOC106602993 | coding | downstream | 616932 | 44646793 ~ 44648830 (+) |
| cldn2 | cldn7 | coding | downstream | 689439 | 44719300 ~ 44721744 (+) |
| LOC110490127 | LOC106602822 | coding | downstream | 705899 | 44735760 ~ 44848514 (+) |
| G1295843 | NA | non-coding | upstream | 1558 | 44027587 ~ 44027878 (+) |
| G1295789 | NA | non-coding | upstream | 67139 | 43961985 ~ 43962297 (+) |
| G1295788 | NA | non-coding | upstream | 68539 | 43960438 ~ 43960897 (+) |
| G1295787 | NA | non-coding | upstream | 69830 | 43959399 ~ 43959606 (+) |
| G1295775 | NA | non-coding | upstream | 80036 | 43949184 ~ 43949400 (+) |
| G1295849 | NA | non-coding | downstream | 7529 | 44037390 ~ 44037673 (+) |
| G1295872 | NA | non-coding | downstream | 41125 | 44070986 ~ 44123435 (+) |
| G1295887 | cfap54 | non-coding | downstream | 64941 | 44094802 ~ 44095443 (+) |
| G1296030 | NA | non-coding | downstream | 122834 | 44152695 ~ 44153020 (+) |
| G1296051 | NA | non-coding | downstream | 138227 | 44168088 ~ 44168835 (+) |
| G1295730 | NA | other | upstream | 112957 | 43916178 ~ 43916479 (+) |
| G1295348 | LOC106602853 | other | upstream | 431972 | 43596924 ~ 43597464 (+) |
| G1294319 | NA | other | upstream | 1261499 | 42764853 ~ 42767937 (+) |
| G1293295 | NA | other | upstream | 2119825 | 41909034 ~ 41909611 (+) |
| G1293072 | NA | other | upstream | 2441292 | 41583216 ~ 41589030 (+) |
| G1296266 | LOC106602826 | other | downstream | 517318 | 44547179 ~ 44581048 (+) |
| G1296185 | NA | other | downstream | 619840 | 44649701 ~ 44652079 (+) |
| G1298452 | NA | other | downstream | 2224478 | 46254339 ~ 46260437 (+) |
| brd1a | LOC106575995 | other | downstream | 2284391 | 46293582 ~ 46316075 (+) |
